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PLM3_30_b1_sep16_scaffold_1363

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_1363_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1..411
DNA (411bp) protein (137aa)
Chromosomal replication initiator protein DnaA Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THJ8_NIAKG
chromosomal replication initiator protein DnaA
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_1363_2
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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480..755
DNA (276bp) protein (92aa)
Acylphosphatase Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PI51_CHIPD
acylphosphatase
Acylphosphatase {ECO:0000256|SAAS:SAAS00255930}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
PLM3_30_b1_sep16_scaffold_1363_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1058..1441
DNA (384bp) protein (128aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJY4_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02922.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_1363_4
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1610..2554
DNA (945bp) protein (315aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJY1_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC94710.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_1363_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2573..4126
DNA (1554bp) protein (518aa)
Phosphoesterase PA-phosphatase related protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJY0_NIAKG
phosphoesterase PA-phosphatase-like protein
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:AEW02918.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_1363_6
unknown

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4162..4305
DNA (144bp) protein (48aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_1363_7
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4549..5010
DNA (462bp) protein (154aa)
Putative redox protein, regulator of disulfide bond formation Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0CIL5_RHILT
Peroxiredoxin {ECO:0000313|EMBL:KJE45923.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas viridans.;"
OsmC family protein
PLM3_30_b1_sep16_scaffold_1363_8
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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5020..5418
DNA (399bp) protein (133aa)
Uncharacterized protein Tax=Fulvivirga imtechensis AK7 RepID=L8JWN1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR72608.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
amino acid-binding ACT domain-containing protein
PLM3_30_b1_sep16_scaffold_1363_9
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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5418..6104
DNA (687bp) protein (229aa)
Putative transcriptional regulator Tax=Flavobacterium sp. CF136 RepID=J2SMU7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EZH74044.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
ydfF; putative HTH-type transcriptional regulator ydfF
PLM3_30_b1_sep16_scaffold_1363_trna_1
unknown

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6438..6526
DNA (89bp)
transferRNA Ser
PLM3_30_b1_sep16_scaffold_1363_10
unknown

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comp(6530..6877)
DNA (348bp) protein (116aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_1363_11
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6923..9421)
DNA (2499bp) protein (833aa)
hypothetical protein Tax=Nevskia ramosa RepID=UPI0003B7AE52
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB26683.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis JS623.;"
PLM3_30_b1_sep16_scaffold_1363_trna_2
unknown

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9634..9707
DNA (74bp)
transferRNA Pro
PLM3_30_b1_sep16_scaffold_1363_trna_3
unknown

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10032..10103
DNA (72bp)
transferRNA His
PLM3_30_b1_sep16_scaffold_1363_12
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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10169..10750
DNA (582bp) protein (194aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC90662.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
PLM3_30_b1_sep16_scaffold_1363_13
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10825..11418
DNA (594bp) protein (198aa)
hypothetical protein Tax=Scytonema hofmanni RepID=UPI000344AA39
Integral membrane protein
Integral membrane protein {ECO:0000313|EMBL:AIY44168.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
PLM3_30_b1_sep16_scaffold_1363_14
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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11569..13719
DNA (2151bp) protein (717aa)
Candidate alpha-glucosidase Glycoside hydrolase family 97 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FK37_FLAJ1
Alpha-glucosidase {ECO:0000313|EMBL:KFF16268.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_1363_15
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13901..16048)
DNA (2148bp) protein (716aa)
Uncharacterized protein Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PFD9_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:ACU61644.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_1363_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16815..18080)
DNA (1266bp) protein (422aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Homoserine dehydrogenase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK84_NIAKG
homoserine dehydrogenase
PLM3_30_b1_sep16_scaffold_1363_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18082..19248)
DNA (1167bp) protein (389aa)
Cystathionine gamma-lyase {ECO:0000313|EMBL:AEV96520.1}; EC=4.4.1.1 {ECO:0000313|EMBL:AEV96520.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Cystathionine gamma-lyase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK86_NIAKG
cystathionine gamma-lyase
PLM3_30_b1_sep16_scaffold_1363_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19755..20402)
DNA (648bp) protein (216aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK88_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV96522.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_1363_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20530..21021)
DNA (492bp) protein (164aa)
OmpA/MotB domain protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK89_NIAKG
OmpA/MotB domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:AEV96523.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_1363_20
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21186..23981
DNA (2796bp) protein (932aa)
Excinuclease ABC, A subunit Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PC31_CHIPD
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
excinuclease ABC subunit A
PLM3_30_b1_sep16_scaffold_1363_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24390..24788)
DNA (399bp) protein (133aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK92_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV96526.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_1363_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24844..25752)
DNA (909bp) protein (303aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK93_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV96527.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_1363_23
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25891..26349)
DNA (459bp) protein (153aa)
GNAT family acetyltransferase Tax=Dyadobacter beijingensis RepID=UPI000375672D
Uncharacterized protein {ECO:0000313|EMBL:KIC90731.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
N-acetyltransferase GCN5
PLM3_30_b1_sep16_scaffold_1363_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(26592..27872)
DNA (1281bp) protein (427aa)
AAA ATPase central domain protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK95_NIAKG
AAA ATPase
AAA ATPase central domain protein {ECO:0000313|EMBL:AEV96529.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_1363_25

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comp(27914..28771)
DNA (858bp) protein (286aa)
Lipase Tax=uncultured bacterium RepID=C6L860_9BACT
Lipase {ECO:0000313|EMBL:BAH86065.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
lipase
PLM3_30_b1_sep16_scaffold_1363_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(29010..30632)
DNA (1623bp) protein (541aa)
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:AEV96531.1}; EC=6.1.1.12 {ECO:0000313|EMBL:AEV96531.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Aspartate--tRNA ligase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK97_NIAKG
aspartyl-tRNA synthetase
Displaying 29 items

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