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PLM3_30_b1_sep16_scaffold_1440

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_1440_1

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3..1235
DNA (1233bp) protein (411aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=E6QIX6_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI07192.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
amidohydrolase
PLM3_30_b1_sep16_scaffold_1440_2
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1285..1677)
DNA (393bp) protein (131aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC94108.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Putative uncharacterized protein bin=GWF2_Bacteroidetes_49_14 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
hypothetical protein
PLM3_30_b1_sep16_scaffold_1440_3
CG_Maritim_01, Maritimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1872..2282)
DNA (411bp) protein (137aa)
Cupin 2 conserved barrel domain protein
cupin bin=bin9_gal15 species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin9_gal15 organism_group=GAL15
Tax=CG_Maritim_01
PLM3_30_b1_sep16_scaffold_1440_4
unknown

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2493..2714
DNA (222bp) protein (74aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_1440_5
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3050..3544)
DNA (495bp) protein (165aa)
Activator of Hsp90 ATPase 1 family protein Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YIZ9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:GAO41019.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
Activator of Hsp90 ATPase 1 family protein
PLM3_30_b1_sep16_scaffold_1440_6
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3585..4043)
DNA (459bp) protein (153aa)
hypothetical protein Tax=Microbacterium sp. 292MF RepID=UPI0003701991
glutathione S-transferase
Glutathione S-transferase {ECO:0000313|EMBL:AIR52609.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans C54.;"
PLM3_30_b1_sep16_scaffold_1440_7
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(4033..4476)
DNA (444bp) protein (148aa)
Transcriptional regulator, ArsR family Tax=Fibrisoma limi BUZ 3 RepID=I2GMD7_9BACT
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:CCH55064.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
ArsR family transcriptional regulator
PLM3_30_b1_sep16_scaffold_1440_8
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4840..8847)
DNA (4008bp) protein (1336aa)
Rhamnogalacturonan endolyase YesW {ECO:0000313|EMBL:KHJ39298.1}; EC=4.2.2.23 {ECO:0000313|EMBL:KHJ39298.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
rhamnogalacturonan lyase (EC:3.2.1.-)
CHU large protein; candidate rhamnogalacturonan lyase, polysaccharide lyase family 11 protein Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11VY4_CYTH3
PLM3_30_b1_sep16_scaffold_1440_trna_1
unknown

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9095..9166
DNA (72bp)
transferRNA Arg
PLM3_30_b1_sep16_scaffold_1440_9
Flavobacterium sp. MEB061, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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9398..10279
DNA (882bp) protein (294aa)
hypothetical protein Tax=Flavobacterium sp. WG21 RepID=UPI00034878D4
Contig_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ21829.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. MEB061.;"
esterase
PLM3_30_b1_sep16_scaffold_1440_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(10574..12070)
DNA (1497bp) protein (499aa)
Beta-lactamase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9B4_NIAKG
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:AEV98082.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_1440_11
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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12420..13193
DNA (774bp) protein (258aa)
Uncharacterized protein Tax=Fibrisoma limi BUZ 3 RepID=I2GBI6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:GAO42504.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_1440_12
unknown

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13346..14080
DNA (735bp) protein (245aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_1440_13
Winogradskyella sp. PG-2, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14324..14494
DNA (171bp) protein (57aa)
hypothetical protein Tax=Flavobacteriaceae bacterium P7-3-5 RepID=UPI0003755BDF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO77711.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Winogradskyella.;" source="Winogradskyella sp. PG-2.;"
Displaying 14 items

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