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PLM3_30_b1_sep16_scaffold_2037

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_2037_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3..614
DNA (612bp) protein (204aa)
KpsF/GutQ family protein {ECO:0000313|EMBL:AEW02632.1}; EC=5.3.1.13 {ECO:0000313|EMBL:AEW02632.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
KpsF/GutQ family protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDZ8_NIAKG
KpsF/GutQ family protein
PLM3_30_b1_sep16_scaffold_2037_2
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

676..1731
DNA (1056bp) protein (352aa)
Mannose-1-phosphate guanylyltransferase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE00_NIAKG
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:KIC96377.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
mannose-1-phosphate guanylyltransferase
PLM3_30_b1_sep16_scaffold_2037_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1812..2525
DNA (714bp) protein (238aa)
3'-5' exonuclease, PolB Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE01_NIAKG
3'-5' exonuclease
3'-5' exonuclease, PolB {ECO:0000313|EMBL:AEW02635.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2037_4
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3120..3509
DNA (390bp) protein (130aa)
Endoribonuclease L-PSP Tax=Niabella soli DSM 19437 RepID=H1NTX4_9SPHI
Endoribonuclease L-PSP {ECO:0000313|EMBL:KIC90958.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2037_5
unknown

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comp(3528..3965)
DNA (438bp) protein (146aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2037_6
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

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comp(4008..4577)
DNA (570bp) protein (190aa)
Uncharacterized protein Tax=Pontibacter sp. BAB1700 RepID=J0V3L5_9BACT
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:KIF22872.1}; species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2037_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4607..5005)
DNA (399bp) protein (133aa)
Putative integral membrane protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCI2_NIAKG
Membrane protein {ECO:0000313|EMBL:KIC96419.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
putative integral membrane protein
PLM3_30_b1_sep16_scaffold_2037_8
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5123..6169
DNA (1047bp) protein (349aa)
Putative signal transduction histidine kinase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCI3_NIAKG
Putative two-component histidine kinase {ECO:0000313|EMBL:GAO42233.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
putative signal transduction histidine kinase
PLM3_30_b1_sep16_scaffold_2037_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6171..6920
DNA (750bp) protein (250aa)
Two component transcriptional regulator, LytTR family Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCI4_NIAKG
LytTR family two component transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:AEW02524.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2037_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(7003..7380)
DNA (378bp) protein (126aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCI5_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02525.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2037_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7454..7966)
DNA (513bp) protein (171aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI00037AF0AE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01260.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2037_12
unknown

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comp(7966..8301)
DNA (336bp) protein (112aa)
Uncharacterized protein Tax=Fibrisoma limi BUZ 3 RepID=I2GCW4_9BACT
PLM3_30_b1_sep16_scaffold_2037_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8340..8915)
DNA (576bp) protein (192aa)
RNA polymerase sigma-70 factor Tax=Niabella aurantiaca RepID=UPI0003690008
RNA polymerase sigma-70 factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
PLM3_30_b1_sep16_scaffold_2037_14
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9049..9531)
DNA (483bp) protein (161aa)
Photosynthetic reaction centre cytochrome c subunit Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EQM6_RUNSL
photosynthetic reaction centre cytochrome c subunit
Photosynthetic reaction centre cytochrome c subunit {ECO:0000313|EMBL:AEI51776.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
PLM3_30_b1_sep16_scaffold_2037_15
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9674..10270
DNA (597bp) protein (199aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCI6_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC96417.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2037_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10340..12091
DNA (1752bp) protein (584aa)
Oligoendopeptidase, M3 family Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCI7_NIAKG
oligoendopeptidase
Oligoendopeptidase, M3 family {ECO:0000313|EMBL:AEW02527.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2037_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12338..12757)
DNA (420bp) protein (140aa)
Ferric uptake regulator, Fur family Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCI8_NIAKG
ferric uptake regulator family protein
Ferric uptake regulator, Fur family {ECO:0000313|EMBL:AEW02528.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2037_18
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12784..13443)
DNA (660bp) protein (220aa)
Electron transport protein SCO1/SenC Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCI9_NIAKG
Electron transporter SenC {ECO:0000313|EMBL:KIC96536.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
electron transport protein SCO1/SenC
PLM3_30_b1_sep16_scaffold_2037_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13554..13946
DNA (393bp) protein (131aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCJ0_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02530.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2037_20
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14031..14549
DNA (519bp) protein (173aa)
Scaffold protein Nfu/NifU Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCJ1_NIAKG
Thioredoxin {ECO:0000313|EMBL:KIC96413.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Scaffold protein Nfu/NifU
Displaying 20 items

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