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PLM3_30_b1_sep16_scaffold_2099

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_2099_1
unknown

Not on your lists

comp(3..62)
DNA (60bp) protein (20aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2099_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(158..1141)
DNA (984bp) protein (328aa)
Beta-lactamase domain protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGF9_NIAKG
beta-lactamase
Beta-lactamase domain protein {ECO:0000313|EMBL:AEV97382.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2099_3
unknown

Not on your lists

1273..1584
DNA (312bp) protein (104aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2099_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1609..2334)
DNA (726bp) protein (242aa)
Aspartate transaminase {ECO:0000313|EMBL:AEV97380.1}; EC=2.6.1.1 {ECO:0000313|EMBL:AEV97380.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Aspartate transaminase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGF7_NIAKG
aspartate transaminase
PLM3_30_b1_sep16_scaffold_2099_5
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2331..2723)
DNA (393bp) protein (131aa)
Aspartate transaminase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGF7_NIAKG
Aspartate aminotransferase {ECO:0000313|EMBL:KIC94296.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
aspartate transaminase
PLM3_30_b1_sep16_scaffold_2099_6
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2774..4012)
DNA (1239bp) protein (413aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003759AB8
Uncharacterized protein {ECO:0000313|EMBL:KIC94294.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2099_7
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4062..7358
DNA (3297bp) protein (1099aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037C7C56
Preprotein translocase subunit SecD/SecF {ECO:0000313|EMBL:KIC90195.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
protein translocase subunit secD
PLM3_30_b1_sep16_scaffold_2099_8
unknown

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comp(7349..7516)
DNA (168bp) protein (56aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2099_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7650..8918
DNA (1269bp) protein (423aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Integral membrane sensor signal transduction histidine kinase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGF3_NIAKG
integral membrane sensor signal transduction histidine kinase
PLM3_30_b1_sep16_scaffold_2099_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8933..9640
DNA (708bp) protein (236aa)
Two component transcriptional regulator, winged helix family Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGF2_NIAKG
two component transcriptional regulator, winged helix family
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEV97375.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2099_11
unknown

Not on your lists

9828..10013
DNA (186bp) protein (62aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2099_12
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10167..10508)
DNA (342bp) protein (114aa)
Iron-sulfur cluster assembly accessory protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGE9_NIAKG
[Fe-S]-binding protein {ECO:0000313|EMBL:KIC94292.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
iron-sulfur cluster assembly accessory protein
PLM3_30_b1_sep16_scaffold_2099_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10865..11422
DNA (558bp) protein (186aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGE8_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97371.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2099_14
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11434..12378
DNA (945bp) protein (315aa)
Methylmalonyl-CoA mutase, large subunit Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGE7_NIAKG
methylmalonyl-CoA mutase large subunit
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:KIC90198.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
PLM3_30_b1_sep16_scaffold_2099_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12327..12923
DNA (597bp) protein (199aa)
Methylmalonyl-CoA mutase, large subunit {ECO:0000313|EMBL:AEV97370.1}; EC=5.4.99.2 {ECO:0000313|EMBL:AEV97370.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Methylmalonyl-CoA mutase, large subunit Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGE7_NIAKG
methylmalonyl-CoA mutase large subunit
PLM3_30_b1_sep16_scaffold_2099_16
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13114..14739)
DNA (1626bp) protein (542aa)
ABC transporter Tax=Segetibacter koreensis RepID=UPI000363E87B
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIC94948.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
ABC transporter
PLM3_30_b1_sep16_scaffold_2099_17
unknown

Not on your lists

14830..14979
DNA (150bp) protein (50aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2099_18
unknown

Not on your lists

14986..15201
DNA (216bp) protein (72aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2099_19
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15416..17407
DNA (1992bp) protein (664aa)
PAS Tax=Pedobacter sp. BAL39 RepID=A6EBP3_9SPHI
Putative two-component histidine kinase {ECO:0000313|EMBL:GAO43854.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
PAS/PAC sensor signal transduction histidine kinase
PLM3_30_b1_sep16_scaffold_2099_20
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17436..18749
DNA (1314bp) protein (438aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000370B8F8
Uncharacterized protein {ECO:0000313|EMBL:KGO93199.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2099_21
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18823..19632)
DNA (810bp) protein (270aa)
Ricin B lectin Tax=Pontibacter sp. BAB1700 RepID=J0LF72_9BACT
putative protease
Putative protease {ECO:0000313|EMBL:AHJ98998.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
Displaying 21 items

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