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PLM3_30_b1_sep16_scaffold_2800

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_2800_1
unknown

Not on your lists

comp(1..519)
DNA (519bp) protein (173aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2800_2
unknown

Not on your lists

comp(464..670)
DNA (207bp) protein (69aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2800_3
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(707..1768)
DNA (1062bp) protein (354aa)
Transcriptional regulator, AraC family bin=GWF2_Melioribacter_38_21 species=Prevotella sp. oral taxon 472 genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
AraC family transcriptional regulator
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
PLM3_30_b1_sep16_scaffold_2800_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1816..2256)
DNA (441bp) protein (147aa)
Phosphoribosyltransferase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THW6_NIAKG
phosphoribosyltransferase
Phosphoribosyltransferase {ECO:0000313|EMBL:AEV98561.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2800_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2331..3653
DNA (1323bp) protein (441aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THW7_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98562.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2800_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3700..4542)
DNA (843bp) protein (281aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THW9_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98564.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2800_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4714..5775)
DNA (1062bp) protein (354aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THX0_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC93721.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2800_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5772..6500)
DNA (729bp) protein (243aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THX1_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98566.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2800_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6488..6988)
DNA (501bp) protein (167aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THX2_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98567.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2800_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7029..7562)
DNA (534bp) protein (178aa)
YceI family protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THX3_NIAKG
hypothetical protein
YceI family protein {ECO:0000313|EMBL:AEV98568.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2800_11
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7651..8046)
DNA (396bp) protein (132aa)
DoxX family protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8G1_NIAKG
DoxX family protein {ECO:0000313|EMBL:KIC94863.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
DoxX family protein
PLM3_30_b1_sep16_scaffold_2800_12
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8314..9102
DNA (789bp) protein (263aa)
Fe-S oxidoreductase Tax=Niabella aurantiaca RepID=UPI00036FE1F5
CoB--CoM heterodisulfide reductase {ECO:0000313|EMBL:KIC90099.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
Fe-S oxidoreductase
PLM3_30_b1_sep16_scaffold_2800_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9112..9630
DNA (519bp) protein (173aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00035C1232
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97585.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2800_trna_1
unknown

Not on your lists

9678..9750
DNA (73bp)
transferRNA Gly
PLM3_30_b1_sep16_scaffold_2800_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(9836..12124)
DNA (2289bp) protein (763aa)
TonB-dependent receptor plug Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XYH9_PEDHD
TonB-dependent receptor plug
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
PLM3_30_b1_sep16_scaffold_2800_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12383..12874
DNA (492bp) protein (164aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB Tax=Niabella soli DSM 19437 RepID=H1NLP6_9SPHI
(dimethylallyl)adenosine tRNA methylthiotransferase
Displaying 16 items

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