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PLM3_30_b1_sep16_scaffold_2809

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_2809_1
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(2..433)
DNA (432bp) protein (144aa)
Permease of the drug/metabolite transporter (DMT) superfamily Tax=Fulvivirga imtechensis AK7 RepID=L8JYP1_9BACT
Permease of the drug/metabolite transporter (DMT) superfamily {ECO:0000313|EMBL:ELR73273.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
DMT(drug/metabolite transporter) superfamily permease
PLM3_30_b1_sep16_scaffold_2809_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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568..1422
DNA (855bp) protein (285aa)
Transcriptional regulator, AraC family Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCP6_NIAKG
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AEW03500.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2809_3
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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1487..1972
DNA (486bp) protein (162aa)
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3_30_b1_sep16_scaffold_2809_4
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2219..3508)
DNA (1290bp) protein (430aa)
Histidinol-phosphate aminotransferase Tax=Flavobacterium frigoris PS1 RepID=H7FUS7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIC93393.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
PLP-dependent enzyme, histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase
PLM3_30_b1_sep16_scaffold_2809_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3655..4194)
DNA (540bp) protein (180aa)
Metallophosphoesterase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIB9_NIAKG
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:AEW00736.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2809_6
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

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4318..4536
DNA (219bp) protein (73aa)
Uncharacterized protein {ECO:0000313|EMBL:KIF31633.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
PLM3_30_b1_sep16_scaffold_2809_7
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4882..6039
DNA (1158bp) protein (386aa)
Homogentisate 12-dioxygenase Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUU7_CHIPD
homogentisate 12-dioxygenase
Homogentisate 12-dioxygenase {ECO:0000313|EMBL:ACU62856.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
PLM3_30_b1_sep16_scaffold_2809_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6313..6927
DNA (615bp) protein (205aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003800173
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AEW00733.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2809_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6935..8221
DNA (1287bp) protein (429aa)
Outer membrane efflux protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIB5_NIAKG
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:AEW00732.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2809_10
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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8223..9023
DNA (801bp) protein (267aa)
Secretion protein HlyD family protein Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SCZ2_PEDSD
hemolysin D
Secretion protein HlyD family protein {ECO:0000313|EMBL:ADY51749.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
PLM3_30_b1_sep16_scaffold_2809_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9119..10036
DNA (918bp) protein (306aa)
Sulfate-transporting ATPase {ECO:0000313|EMBL:AEW00730.1}; EC=3.6.3.25 {ECO:0000313|EMBL:AEW00730.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Sulfate-transporting ATPase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIB3_NIAKG
sulfate-transporting ATPase
PLM3_30_b1_sep16_scaffold_2809_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10079..10822
DNA (744bp) protein (248aa)
Sulfate-transporting ATPase {ECO:0000313|EMBL:AEW00729.1}; EC=3.6.3.25 {ECO:0000313|EMBL:AEW00729.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Sulfate-transporting ATPase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIB2_NIAKG
sulfate-transporting ATPase
PLM3_30_b1_sep16_scaffold_2809_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10900..11955
DNA (1056bp) protein (352aa)
ABC-2 type transporter Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIB1_NIAKG
ABC-2 type transporter
ABC-2 type transporter {ECO:0000313|EMBL:AEW00728.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2809_14
unknown

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comp(11820..12098)
DNA (279bp) protein (93aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2809_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12118..13155
DNA (1038bp) protein (346aa)
ABC-2 type transporter Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIB0_NIAKG
ABC-2 type transporter
ABC-2 type transporter {ECO:0000313|EMBL:AEW00727.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2809_16
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13390..13794
DNA (405bp) protein (135aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037DD0C4
Uncharacterized protein {ECO:0000313|EMBL:GAO43503.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2809_17
unknown

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comp(13775..13972)
DNA (198bp) protein (66aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2809_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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14491..14871
DNA (381bp) protein (127aa)
30S ribosomal protein S13 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIA1_NIAKG
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2809_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


15066..15314
DNA (249bp) protein (83aa)
30S ribosomal protein S11 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIA0_NIAKG
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 19 items

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