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PLM3_30_b1_sep16_scaffold_2861

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_2861_1
unknown

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1..360
DNA (360bp) protein (120aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2861_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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907..2145
DNA (1239bp) protein (413aa)
OmpA/MotB domain protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDZ0_NIAKG
OmpA/MotB domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:AEW02624.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2861_3
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2180..2383
DNA (204bp) protein (68aa)
hypothetical protein Tax=Lewinella cohaerens RepID=UPI000363FD45
Dodecin {ECO:0000313|EMBL:KIC91884.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2861_4
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2495..2920
DNA (426bp) protein (142aa)
Activator of Hsp90 ATPase 1 family protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL28_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83206.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_2861_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2952..3245
DNA (294bp) protein (98aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003629083
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98836.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2861_6
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3617..4291
DNA (675bp) protein (225aa)
Uncharacterized protein Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KR66_SOLCM
Uncharacterized protein {ECO:0000313|EMBL:KIC94607.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2861_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4372..4743
DNA (372bp) protein (124aa)
Uncharacterized protein Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KR67_SOLCM
Uncharacterized protein {ECO:0000313|EMBL:KIC94606.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2861_8
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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4769..5680
DNA (912bp) protein (304aa)
Uncharacterized protein Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BS60_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ERM80748.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2861_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5862..6266
DNA (405bp) protein (135aa)
Cytochrome c, mono-and diheme variants family Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KR73_SOLCM
Cytochrome c, mono-and diheme variants family protein {ECO:0000313|EMBL:KIC94605.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
cytochrome c, mono- and diheme variants family
PLM3_30_b1_sep16_scaffold_2861_10
unknown

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6287..6526
DNA (240bp) protein (80aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2861_11
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6553..7488
DNA (936bp) protein (312aa)
Fe-S-cluster-containing hydrogenase subunit Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KR70_SOLCM
Fe-S-cluster-containing hydrogenase subunit
Fe-S-cluster-containing hydrogenase subunit {ECO:0000313|EMBL:AFD07276.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
PLM3_30_b1_sep16_scaffold_2861_12
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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7490..8797
DNA (1308bp) protein (436aa)
Polysulfide reductase Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KR71_SOLCM
Polysulfide reductase {ECO:0000313|EMBL:KIC94603.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
polysulfide reductase
PLM3_30_b1_sep16_scaffold_2861_13
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8787..9626
DNA (840bp) protein (280aa)
Uncharacterized protein Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KR72_SOLCM
Uncharacterized protein {ECO:0000313|EMBL:KIC94602.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2861_14
Leptospira wolffii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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comp(9899..10381)
DNA (483bp) protein (161aa)
3-demethylubiquinone-9 3-methyltransferase domain protein Tax=Leptospira wolffii serovar Khorat str. Khorat-H2 RepID=S3V0F8_9LEPT
3-demethylubiquinone-9 3-methyltransferase domain protein {ECO:0000313|EMBL:EPG65772.1}; species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira wolffii serovar Khorat str. Khorat-H2.;"
3-demethylubiquinone-9 3-methyltransferase
PLM3_30_b1_sep16_scaffold_2861_15
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(10558..11016)
DNA (459bp) protein (153aa)
Activator of Hsp90 ATPase 1 family protein Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJ74_CHIPD
activator of Hsp90 ATPase 1 family protein
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:ACU61942.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
PLM3_30_b1_sep16_scaffold_2861_16
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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11333..12403
DNA (1071bp) protein (357aa)
Putative uncharacterized protein Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VRW6_DYAFD
hypothetical protein
Tax=RBG_16_Ignavibacteria_36_9_curated
PLM3_30_b1_sep16_scaffold_2861_17
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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comp(13536..15314)
DNA (1779bp) protein (593aa)
ATP-binding protein of ABC transporter Tax=Cystobacter fuscus DSM 2262 RepID=S9P7Q0_9DELT
ABC transporter ATPase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3_30_b1_sep16_scaffold_2861_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(15526..15924)
DNA (399bp) protein (133aa)
SWIB/MDM2 domain-containing protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQD1_NIAKG
SWIB/MDM2 domain-containing protein
SWIB/MDM2 domain-containing protein {ECO:0000313|EMBL:AEW02145.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2861_19
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16317..17381
DNA (1065bp) protein (355aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC93411.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Choloylglycine hydrolase bin=GWE2_Bacteroidetes_42_42 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
choloylglycine hydrolase
PLM3_30_b1_sep16_scaffold_2861_20
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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17505..18740
DNA (1236bp) protein (412aa)
Type I phosphodiesterase/nucleotide pyrophosphatase Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EMM5_RUNSL
type I phosphodiesterase/nucleotide pyrophosphatase
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:AEI51258.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
PLM3_30_b1_sep16_scaffold_2861_21
unknown

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comp(18972..19145)
DNA (174bp) protein (58aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2861_22
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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19181..19903
DNA (723bp) protein (241aa)
TonB-denpendent receptor Tax=Cytophagales str. B6 RepID=UPI0003B3AA81
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ACU64192.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Displaying 22 items

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