ggKbase home page

PLM3_30_b1_sep16_scaffold_9542

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_9542_1
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(1..1476)
DNA (1476bp) protein (492aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase Tax=Fibrella aestuarina BUZ 2 RepID=I0KBS6_9BACT
PLM3_30_b1_sep16_scaffold_9542_2
unknown

Not on your lists

comp(2002..2178)
DNA (177bp) protein (59aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_9542_3
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2244..2669)
DNA (426bp) protein (142aa)
Uncharacterized protein bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
Tax=GWA2_Bacteroidetes_31_9b_curated
PLM3_30_b1_sep16_scaffold_9542_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2891..3307)
DNA (417bp) protein (139aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGL7_NIAKG
Glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AEV98459.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_9542_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3533..3946)
DNA (414bp) protein (138aa)
Transcriptional regulator, AraC family Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGL5_NIAKG
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AEV98457.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_9542_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4040..4696)
DNA (657bp) protein (219aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBP6_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98178.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_9542_7
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4765..5511)
DNA (747bp) protein (249aa)
N-acetylmuramoyl-L-alanine amidase AmpD {ECO:0000313|EMBL:EOR95180.1}; EC=3.5.1.28 {ECO:0000313|EMBL:EOR95180.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
N-acetylmuramoyl-L-alanine amidase AmpD Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GUK9_9SPHI
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
PLM3_30_b1_sep16_scaffold_9542_8
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5508..6731)
DNA (1224bp) protein (408aa)
short chain dehydrogenase family protein
Tax=GWA2_Bacteroidetes_31_9b_curated
PLM3_30_b1_sep16_scaffold_9542_9
unknown

Not on your lists

comp(6738..7205)
DNA (468bp) protein (156aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_9542_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7593..8867
DNA (1275bp) protein (425aa)
Chaperone protein DnaK Tax=Niabella soli DSM 19437 RepID=H1NJH7_9SPHI
dnaK; molecular chaperone DnaK
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Displaying 10 items

View Taxonomy