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PLM3_30_b1_sep16_scaffold_3063

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_3063_1
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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438..974
DNA (537bp) protein (179aa)
Uncharacterized protein Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GQP7_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EOR93870.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_3063_2
unknown

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comp(977..1108)
DNA (132bp) protein (44aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_3063_3
unknown

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1172..2056
DNA (885bp) protein (295aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_3063_4
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2089..2898)
DNA (810bp) protein (270aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000377E81A
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:KIC94701.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
PLM3_30_b1_sep16_scaffold_3063_5
unknown

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comp(3100..3291)
DNA (192bp) protein (64aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_3063_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3641..4126
DNA (486bp) protein (162aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIN8_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEW02891.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_3063_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4205..5269
DNA (1065bp) protein (355aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIN7_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02890.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_3063_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5299..6090
DNA (792bp) protein (264aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIN6_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02889.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_3063_9
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6676..7227
DNA (552bp) protein (184aa)
ErfK/YbiS/YcfS/YnhG family protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIN5_NIAKG
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:KIC92191.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
ErfK/YbiS/YcfS/YnhG family protein
PLM3_30_b1_sep16_scaffold_3063_10
unknown

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comp(7316..7609)
DNA (294bp) protein (98aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_3063_11
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(7625..9472)
DNA (1848bp) protein (616aa)
acetyl-CoA synthetase (EC:6.2.1.1)
Acetyl-CoA synthetase {ECO:0000313|EMBL:AKD05631.1}; EC=6.2.1.1 {ECO:0000313|EMBL:AKD05631.1};; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
Acetate--CoA ligase Tax=Pontibacter sp. BAB1700 RepID=J0LNP5_9BACT
PLM3_30_b1_sep16_scaffold_3063_12
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9642..11180
DNA (1539bp) protein (513aa)
General substrate transporter Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIN2_NIAKG
MFS transporter {ECO:0000313|EMBL:KIC92187.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
general substrate transporter
PLM3_30_b1_sep16_scaffold_3063_13
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11260..11520
DNA (261bp) protein (87aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIN1_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC92186.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_3063_14
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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comp(11748..12419)
DNA (672bp) protein (224aa)
NADH dehydrogenase (Quinone) Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KRX2_HALH1
NADH dehydrogenase (quinone)
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
PLM3_30_b1_sep16_scaffold_3063_15
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(12646..13554)
DNA (909bp) protein (303aa)
NADH dehydrogenase (Quinone) Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KRX2_HALH1
NADH dehydrogenase (quinone)
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
PLM3_30_b1_sep16_scaffold_3063_16
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(13562..16108)
DNA (2547bp) protein (849aa)
UPF0753 protein Nmul_A0708 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Y708_NITMU
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
PLM3_30_b1_sep16_scaffold_3063_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(16109..17734)
DNA (1626bp) protein (542aa)
Sulphate transporter Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KRX5_HALH1
sulfate transporter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
PLM3_30_b1_sep16_scaffold_3063_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(17799..18458)
DNA (660bp) protein (220aa)
Prokaryotic-type carbonic anhydrase (EC:4.2.1.1)
Carbonic anhydrase Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZQ98_9BACT
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
PLM3_30_b1_sep16_scaffold_3063_19
unknown

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comp(18588..18983)
DNA (396bp) protein (132aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_3063_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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19082..19717
DNA (636bp) protein (212aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Carbonic anhydrase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIM8_NIAKG
carbonate dehydratase
PLM3_30_b1_sep16_scaffold_3063_21
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19755..20885
DNA (1131bp) protein (377aa)
Glycosidase PH1107-related protein Tax=Fibrisoma limi BUZ 3 RepID=I2GTH5_9BACT
Glycosidase PH1107-related protein {ECO:0000313|EMBL:CCH57204.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
glycosidase-like protein
PLM3_30_b1_sep16_scaffold_3063_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21141..22058
DNA (918bp) protein (306aa)
Protein involved in gliding motility GldA {ECO:0000313|EMBL:AEW02880.1}; EC=3.6.3.25 {ECO:0000313|EMBL:AEW02880.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000374B0BA
gliding motility protein GldA
PLM3_30_b1_sep16_scaffold_3063_23
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22098..23387
DNA (1290bp) protein (430aa)
eno; enolase (EC:4.2.1.11)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Enolase Tax=Niabella soli DSM 19437 RepID=H1NTC9_9SPHI
PLM3_30_b1_sep16_scaffold_3063_24
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23882..24115
DNA (234bp) protein (78aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIM3_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC94745.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_3063_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24167..24820
DNA (654bp) protein (218aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Endonuclease III Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIM2_NIAKG
endonuclease III
PLM3_30_b1_sep16_scaffold_3063_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24986..25891
DNA (906bp) protein (302aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000366B304
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV96527.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_3063_27
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25988..28387
DNA (2400bp) protein (800aa)
Uncharacterized protein Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRL4_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:KIC94743.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_3063_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28517..29410
DNA (894bp) protein (298aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036382F7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02873.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_3063_29
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29410..30867
DNA (1458bp) protein (486aa)
Metallophosphoesterase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIL9_NIAKG
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:AEW02872.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_3063_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30983..32959
DNA (1977bp) protein (659aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00035E2F36
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:AEW02872.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying items 1-30 of 36 in total

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