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PLM3_30_b1_sep16_scaffold_3307

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_3307_1
Burkholderia sp. CCGE1002, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..217)
DNA (216bp) protein (72aa)
Aldo/keto reductase Tax=Burkholderia sp. (strain CCGE1002) RepID=D5WHK4_BURSC
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ADG17949.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain CCGE1002).;"
PLM3_30_b1_sep16_scaffold_3307_2
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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530..1375
DNA (846bp) protein (282aa)
O-6-methylguanine DNA methyltransferase Tax=Flavobacterium sp. CF136 RepID=J3C860_9FLAO
Cysteine methyltransferase {ECO:0000313|EMBL:KIX22738.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
AraC family transcriptional regulator
PLM3_30_b1_sep16_scaffold_3307_3
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

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1714..2442
DNA (729bp) protein (243aa)
alpha/beta hydrolase fold protein Tax=Aquimarina agarilytica RepID=UPI00028A3107
Uncharacterized protein {ECO:0000313|EMBL:KIF33860.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
alpha/beta hydrolase fold protein
PLM3_30_b1_sep16_scaffold_3307_4
unknown

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2487..2633
DNA (147bp) protein (49aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_3307_5
unknown

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2853..3221
DNA (369bp) protein (123aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_3307_6
unknown

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3416..3649
DNA (234bp) protein (78aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_3307_7
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3660..4337
DNA (678bp) protein (226aa)
hypothetical protein Tax=Flavobacterium sp. WG21 RepID=UPI00034AC630
Acetyltransferase {ECO:0000313|EMBL:KFF17322.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
acetyltransferase
PLM3_30_b1_sep16_scaffold_3307_8
Burkholderia sp. MSh2, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4359..4724
DNA (366bp) protein (122aa)
Putative uncharacterized protein Tax=Burkholderia sp. (strain 383) RepID=Q39NJ7_BURS3
Uncharacterized protein {ECO:0000313|EMBL:KEZ02688.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSh2.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_3307_9
unknown

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comp(4943..5071)
DNA (129bp) protein (43aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_3307_10
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(5199..6437)
DNA (1239bp) protein (413aa)
Glucose sorbosone dehydrogenase Tax=Fibrisoma limi BUZ 3 RepID=I2GLE5_9BACT
Glucose sorbosone dehydrogenase {ECO:0000313|EMBL:CCH54721.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
glucose sorbosone dehydrogenase
PLM3_30_b1_sep16_scaffold_3307_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6814..7242
DNA (429bp) protein (143aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPN1_NIAKG
Glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AEV98864.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_3307_12
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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7342..8820
DNA (1479bp) protein (493aa)
Putative beta-lactamase Tax=Paenibacillus sp. JCM 10914 RepID=V9GGY3_9BACL
penicillin-binding protein, beta-lactamase class C
Tax=RBG_16_Acidobacteria_70_10_curated
PLM3_30_b1_sep16_scaffold_3307_13
RBG_13_Spirochaetes_51_14_curated, Spirochaetes, Bacteria

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8928..9812
DNA (885bp) protein (295aa)
Tax=RBG_13_Spirochaetes_51_14_curated
PLM3_30_b1_sep16_scaffold_3307_14

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9831..10307
DNA (477bp) protein (159aa)
Putative pyridoxamine 5'-phosphate oxidase Tax=uncultured marine crenarchaeote HF4000_ANIW133I6 RepID=B3T411_9ARCH
Pyridoxamine 5'-phosphate oxidase family protein {ECO:0000313|EMBL:AIF21672.1}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote SAT1000_05_G10.;"
Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
PLM3_30_b1_sep16_scaffold_3307_15
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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10401..12200
DNA (1800bp) protein (600aa)
ABC transporter related Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU02_CHIPD
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEQ30325.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
ABC transporter
PLM3_30_b1_sep16_scaffold_3307_16
Kordia algicida, Kordia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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12483..13025
DNA (543bp) protein (181aa)
Metalloendopeptidase Tax=Kordia algicida OT-1 RepID=A9EBG5_9FLAO
Metalloendopeptidase {ECO:0000313|EMBL:EDP94468.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Kordia.;" source="Kordia algicida OT-1.;"
metalloendopeptidase
PLM3_30_b1_sep16_scaffold_3307_17
Winogradskyella sp. PG-2, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13182..13478
DNA (297bp) protein (99aa)
Uncharacterized protein Tax=Leptospira noguchii serovar Panama str. CZ214 RepID=T0GR76_9LEPT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO76591.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Winogradskyella.;" source="Winogradskyella sp. PG-2.;"
PLM3_30_b1_sep16_scaffold_3307_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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13527..14405
DNA (879bp) protein (293aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
PLM3_30_b1_sep16_scaffold_3307_19
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14627..15763)
DNA (1137bp) protein (379aa)
mannan endo-1,4-beta-mannosidase (EC:3.2.1.78)
Mannan endo-1,4-beta-mannosidase bin=GWC2_Bacteroidetes_40_22 species=Spirosoma linguale genus=Spirosoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
Tax=GWA2_Bacteroidetes_40_15_curated
PLM3_30_b1_sep16_scaffold_3307_20
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16204..16983)
DNA (780bp) protein (260aa)
Uncharacterized protein Tax=Pedobacter sp. BAL39 RepID=A6EE23_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EDM36117.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
GDSL family lipase
PLM3_30_b1_sep16_scaffold_3307_21
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16996..18399)
DNA (1404bp) protein (468aa)
Sialate O-acetylesterase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGS0_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:ETZ20667.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
sialate O-acetylesterase
PLM3_30_b1_sep16_scaffold_3307_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18892..19203
DNA (312bp) protein (104aa)
transcription initiation protein Tax=Segetibacter koreensis RepID=UPI0003627E9C
hypothetical protein
YCII-related protein {ECO:0000313|EMBL:AEV98335.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_3307_23
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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19363..20586
DNA (1224bp) protein (408aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003653770
ECF subfamily RNA polymerase sigma-24 subunit
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEE53445.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
PLM3_30_b1_sep16_scaffold_3307_24
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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20650..21183
DNA (534bp) protein (178aa)
Putative uncharacterized protein Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VU89_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96571.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
PLM3_30_b1_sep16_scaffold_3307_25
unknown

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21193..21597
DNA (405bp) protein (135aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_3307_26
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21961..22413)
DNA (453bp) protein (151aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC92814.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
PLM3_30_b1_sep16_scaffold_3307_27
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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22714..23037
DNA (324bp) protein (108aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO43573.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
PLM3_30_b1_sep16_scaffold_3307_28
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23148..23891
DNA (744bp) protein (248aa)
Ankyrin Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KVY0_HALH1
Uncharacterized protein {ECO:0000313|EMBL:ETZ20718.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
ankyrin
PLM3_30_b1_sep16_scaffold_3307_29
unknown

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comp(24079..24285)
DNA (207bp) protein (69aa)

This feature has no annotations

Displaying 29 items

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