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PLM3_30_b1_sep16_scaffold_989

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_989_1
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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3..968
DNA (966bp) protein (322aa)
ASPIC/UnbV domain protein bin=GWC2_Bacteroidetes_40_22 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
ASPIC/UnbV domain-containing protein
Tax=GWA2_Bacteroidetes_40_15_curated
PLM3_30_b1_sep16_scaffold_989_2
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1166..1507)
DNA (342bp) protein (114aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036019B4
Putative blue copper protein {ECO:0000313|EMBL:GAO44710.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
putative Cupredoxin
PLM3_30_b1_sep16_scaffold_989_3
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1679..3139)
DNA (1461bp) protein (487aa)
Glucan endo-1,6-beta-glucosidase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TA23_NIAKG
Glucosylceramidase {ECO:0000313|EMBL:KIA85440.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
glucan endo-1,6-beta-glucosidase
PLM3_30_b1_sep16_scaffold_989_4
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(3412..4245)
DNA (834bp) protein (278aa)
Glycoside hydrolase family 16 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T120_PALPW
glycoside hydrolase
Tax=BJP_08E140C01_Flavobacteriales_35_8
PLM3_30_b1_sep16_scaffold_989_5
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4485..5417)
DNA (933bp) protein (311aa)
Probable lipoprotein Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z0K0_FLABF
Uncharacterized protein {ECO:0000313|EMBL:KIA85388.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
putative lipoprotein
PLM3_30_b1_sep16_scaffold_989_6
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(5428..6528)
DNA (1101bp) protein (367aa)
Probable lipoprotein Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z0J9_FLABF
Uncharacterized protein {ECO:0000313|EMBL:KIA85389.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
putative lipoprotein
PLM3_30_b1_sep16_scaffold_989_7
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(6540..8051)
DNA (1512bp) protein (504aa)
Carbohydrate-binding protein SusD {ECO:0000313|EMBL:KIA85390.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
Probable lipoprotein, SusD/RagB family bin=GWA2_Flavobacterium_35_26 species=Flavobacterium branchiophilum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
putative SusD/RagB family lipoprotein
PLM3_30_b1_sep16_scaffold_989_8
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(8161..10977)
DNA (2817bp) protein (939aa)
TonB-dependent receptor plug Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TA25_NIAKG
TonB-dependent receptor {ECO:0000313|EMBL:KIA85391.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
TonB-dependent receptor plug
PLM3_30_b1_sep16_scaffold_989_9
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11172..12383
DNA (1212bp) protein (404aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00035EBD00
Putative two-component response regulator {ECO:0000313|EMBL:GAO42224.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
Two component regulator three Y domain-containing protein
PLM3_30_b1_sep16_scaffold_989_10
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12536..13867
DNA (1332bp) protein (444aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00035EBD00
Putative two-component response regulator {ECO:0000313|EMBL:GAO42224.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_989_11
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(13872..14204)
DNA (333bp) protein (111aa)
Glucosamine-6-phosphate deaminase {ECO:0000313|EMBL:EON77129.1}; EC=3.5.99.6 {ECO:0000313|EMBL:EON77129.1};; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacteriaceae bacterium AK24.;"
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00035C10F5
nagB; glucosamine-6-phosphate deaminase
PLM3_30_b1_sep16_scaffold_989_12
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14251..15993)
DNA (1743bp) protein (581aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000361150E
Uncharacterized protein {ECO:0000313|EMBL:EON77347.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacteriaceae bacterium AK24.;"
cytochrome c class I
PLM3_30_b1_sep16_scaffold_989_13
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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16341..17438
DNA (1098bp) protein (366aa)
Putative hydrolase of alpha/beta superfamily Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KXX1_SOLCM
putative hydrolase of alpha/beta superfamily
Putative hydrolase of alpha/beta superfamily {ECO:0000313|EMBL:AFD05647.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
PLM3_30_b1_sep16_scaffold_989_14
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17448..18446
DNA (999bp) protein (333aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QIM1_SPILD
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein {ECO:0000313|EMBL:ADB39947.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
PLM3_30_b1_sep16_scaffold_989_15
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

18460..19197
DNA (738bp) protein (246aa)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AEI48324.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEI48324.1};; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
3-oxoacyl-(Acyl-carrier-protein) reductase Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EFH8_RUNSL
3-oxoacyl-ACP reductase
PLM3_30_b1_sep16_scaffold_989_16
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(19461..20792)
DNA (1332bp) protein (444aa)
Putative amidohydrolase Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D5W6_SINAD
amidohydrolase
Tax=RBG_13_Planctomycetes_62_9_curated
PLM3_30_b1_sep16_scaffold_989_17
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21244..22209)
DNA (966bp) protein (322aa)
hypothetical protein Tax=Eudoraea adriatica RepID=UPI000375DD5D
Uncharacterized protein {ECO:0000313|EMBL:EIJ39405.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_989_18
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22228..23409)
DNA (1182bp) protein (394aa)
N-acetyl-L,L-diaminopimelate deacetylase {ECO:0000313|EMBL:EOR96007.1}; EC=3.5.1.47 {ECO:0000313|EMBL:EOR96007.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000376634D
amidohydrolase
PLM3_30_b1_sep16_scaffold_989_19
unknown

Not on your lists

comp(23623..23739)
DNA (117bp) protein (39aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_989_20
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23702..26809)
DNA (3108bp) protein (1036aa)
hypothetical protein Tax=Flavobacterium sp. WG21 RepID=UPI0003482C8B
Strain DSM 12611 Contig15, whole genome shotgun sequence {ECO:0000313|EMBL:KIO51467.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_989_21
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26900..27997
DNA (1098bp) protein (366aa)
Amidohydrolase 2 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L623_HALH1
amidohydrolase
Amidohydrolase 2 {ECO:0000313|EMBL:AEE53083.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
PLM3_30_b1_sep16_scaffold_989_22
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(28353..30068)
DNA (1716bp) protein (572aa)
NHL repeat containing protein Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W0Q4_DYAFD
NHL repeat containing protein
NHL repeat containing protein {ECO:0000313|EMBL:ACT93660.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
PLM3_30_b1_sep16_scaffold_989_23
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(30164..31702)
DNA (1539bp) protein (513aa)
Uncharacterized protein Tax=Pedobacter sp. BAL39 RepID=A6E979_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHM62254.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_989_24
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(31749..35048)
DNA (3300bp) protein (1100aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037A7E6C
ASPIC/UnbV domain protein {ECO:0000313|EMBL:AEI51264.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
ASPIC/UnbV domain-containing protein
Displaying 24 items

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