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PLM3_30_b2_sep16_scaffold_1683

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_1683_1
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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1..1506
DNA (1506bp) protein (502aa)
FOG: Ankyrin repeat-like protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RF8_SOLUE
ankyrin repeat-containing protein
FOG: Ankyrin repeat-like protein {ECO:0000313|EMBL:ABJ87762.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_30_b2_sep16_scaffold_1683_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(2264..3553)
DNA (1290bp) protein (430aa)
Tryptophan halogenase Tax=Pedosphaera parvula Ellin514 RepID=B9XGA7_9BACT
Tryptophan halogenase {ECO:0000313|EMBL:EEF61269.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
monooxygenase FAD-binding protein
PLM3_30_b2_sep16_scaffold_1683_3
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(3599..4300)
DNA (702bp) protein (234aa)
Short-chain dehydrogenase/reductase SDR Tax=Planctomyces maris DSM 8797 RepID=A6C8Y5_9PLAN
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EDL58891.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
short-chain alcohol dehydrogenase
PLM3_30_b2_sep16_scaffold_1683_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(4552..5574)
DNA (1023bp) protein (341aa)
Chaperone protein DnaJ Tax=Pedosphaera parvula Ellin514 RepID=B9XFY3_9BACT
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
molecular chaperone DnaJ
PLM3_30_b2_sep16_scaffold_1683_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(5571..6707)
DNA (1137bp) protein (379aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
chorismate synthase (EC:4.2.3.5)
Chorismate synthase Tax=Pedosphaera parvula Ellin514 RepID=B9XG57_9BACT
PLM3_30_b2_sep16_scaffold_1683_6
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(6823..7872)
DNA (1050bp) protein (350aa)
hypothetical protein Tax=Verrucomicrobium spinosum RepID=UPI00017450B7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB74796.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM3_30_b2_sep16_scaffold_1683_7
unknown

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comp(7883..9355)
DNA (1473bp) protein (491aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_1683_8
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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comp(9454..10608)
DNA (1155bp) protein (385aa)
hypothetical protein Tax=Verrucomicrobium spinosum RepID=UPI00017450B6
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
PLM3_30_b2_sep16_scaffold_1683_9
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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comp(10742..11437)
DNA (696bp) protein (232aa)
ABC transporter ATP-binding protein Tax=Verrucomicrobium spinosum RepID=UPI00017450B5
ABC transporter-like protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
PLM3_30_b2_sep16_scaffold_1683_10
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(11434..12678)
DNA (1245bp) protein (415aa)
Efflux transporter, RND family, MFP subunit Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZSV5_OPITP
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACB74799.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM3_30_b2_sep16_scaffold_1683_11
Coraliomargarita akajimensis, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria

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comp(13008..13853)
DNA (846bp) protein (282aa)
Metallophosphoesterase Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) RepID=D5EPM5_CORAD
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ADE53762.1}; species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Coraliomargarita.;" source="Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193; / KCTC 12865).;"
PLM3_30_b2_sep16_scaffold_1683_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(14111..14689)
DNA (579bp) protein (193aa)
Two component transcriptional regulator, winged helix family Tax=Pedosphaera parvula Ellin514 RepID=B9XG93_9BACT
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:EEF61255.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
chemotaxis protein CheY
PLM3_30_b2_sep16_scaffold_1683_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(14809..16686)
DNA (1878bp) protein (626aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Integral membrane sensor signal transduction histidine kinase Tax=Pedosphaera parvula Ellin514 RepID=B9XG92_9BACT
histidine kinase
PLM3_30_b2_sep16_scaffold_1683_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(17039..18313)
DNA (1275bp) protein (425aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D314_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY19125.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_1683_15
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(18439..19077)
DNA (639bp) protein (213aa)
Phospholipase/Carboxylesterase Tax=Pedosphaera parvula Ellin514 RepID=B9XS38_9BACT
Phospholipase/Carboxylesterase {ECO:0000313|EMBL:EEF57334.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
serine esterase
PLM3_30_b2_sep16_scaffold_1683_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(19084..19557)
DNA (474bp) protein (158aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Tax=Pedosphaera parvula Ellin514 RepID=B9XJ19_9BACT
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:EEF60246.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
bcp-1; bacterioferritin comigratory protein, thiol peroxidase
PLM3_30_b2_sep16_scaffold_1683_17
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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19876..20286
DNA (411bp) protein (137aa)
Ferredoxin, 2Fe-2S Tax=Pedosphaera parvula Ellin514 RepID=B9XL37_9BACT
Ferredoxin, 2Fe-2S {ECO:0000313|EMBL:EEF59388.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ferredoxin
PLM3_30_b2_sep16_scaffold_1683_18
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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20698..21096
DNA (399bp) protein (133aa)
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase Tax=Pedosphaera parvula Ellin514 RepID=B9XSS8_9BACT
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase {ECO:0000313|EMBL:EEF57095.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
Displaying 18 items

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