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PLM3_30_b2_sep16_scaffold_1755

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_1755_1
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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comp(3..206)
DNA (204bp) protein (68aa)
sufS_[H]; Cysteine desulfurase, SufS subfamily (EC:2.8.1.7)
cysteine desulfurase Tax=Verrucomicrobium spinosum RepID=UPI0001744BF3
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
PLM3_30_b2_sep16_scaffold_1755_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(351..905)
DNA (555bp) protein (185aa)
FeS assembly SUF system protein SufT Tax=Pedosphaera parvula Ellin514 RepID=B9XEV4_9BACT
FeS assembly SUF system protein SufT {ECO:0000313|EMBL:EEF61818.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_1755_3
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(892..1353)
DNA (462bp) protein (154aa)
SufE protein probably involved in Fe-S center assembly Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHT2_PHEZH
SufE protein probably involved in Fe-S center assembly
SufE protein probably involved in Fe-S center assembly {ECO:0000313|EMBL:ACG79123.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
PLM3_30_b2_sep16_scaffold_1755_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(1361..2737)
DNA (1377bp) protein (459aa)
FeS assembly protein SufD Tax=Pedosphaera parvula Ellin514 RepID=B9XEV6_9BACT
FeS assembly protein SufD {ECO:0000313|EMBL:EEF61820.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
iron ABC transporter permease
PLM3_30_b2_sep16_scaffold_1755_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(2760..3533)
DNA (774bp) protein (258aa)
FeS assembly ATPase SufC Tax=Pedosphaera parvula Ellin514 RepID=B9XEL5_9BACT
FeS assembly ATPase SufC {ECO:0000313|EMBL:EEF61729.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
sufC; Fe-S cluster assembly ATP-binding protein SufC
PLM3_30_b2_sep16_scaffold_1755_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(3563..5008)
DNA (1446bp) protein (482aa)
FeS assembly protein SufB Tax=Pedosphaera parvula Ellin514 RepID=B9XEL7_9BACT
FeS assembly protein SufB {ECO:0000313|EMBL:EEF61731.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Iron-regulated ABC transporter membrane component SufB
PLM3_30_b2_sep16_scaffold_1755_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(5080..5541)
DNA (462bp) protein (154aa)
Ferric uptake regulator, Fur family Tax=Pedosphaera parvula Ellin514 RepID=B9XEL8_9BACT
Ferric uptake regulator, Fur family {ECO:0000313|EMBL:EEF61732.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Fur family ferric uptake regulator
PLM3_30_b2_sep16_scaffold_1755_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(5764..6678)
DNA (915bp) protein (305aa)
Xylose isomerase domain protein TIM barrel Tax=Chthoniobacter flavus Ellin428 RepID=B4CYV4_9BACT
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:EDY20645.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_1755_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(6891..8486)
DNA (1596bp) protein (532aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
GAF sensor signal transduction histidine kinase Tax=Pedosphaera parvula Ellin514 RepID=B9XEL2_9BACT
Signal transduction histidine kinase with GAF domain
Displaying 9 items

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