ggKbase home page

PLM3_30_b2_sep16_scaffold_1924

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_1924_1
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

3..1100
DNA (1098bp) protein (366aa)
Transposase of ISGsu4 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q749Z2_GEOSL
transposase of ISGsu4
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
PLM3_30_b2_sep16_scaffold_1924_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(2320..2646)
DNA (327bp) protein (109aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI0002FCEBBE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_30_b2_sep16_scaffold_1924_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(3318..5414)
DNA (2097bp) protein (699aa)
Membrane-bound dehydrogenase domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XPZ2_9BACT
Membrane-bound dehydrogenase domain protein {ECO:0000313|EMBL:EEF58089.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
dehydrogenase
PLM3_30_b2_sep16_scaffold_1924_4
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

5570..9151
DNA (3582bp) protein (1194aa)
AAA ATPase containing von Willebrand factor type A (VWA) protein-like omain bin=GWF2_Lentisphaerae_57_35 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Glycosidases
Tax=GWF2_Lentisphaerae_57_35_curated
PLM3_30_b2_sep16_scaffold_1924_5
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

9148..9783
DNA (636bp) protein (212aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I6I7_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM00875.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM3_30_b2_sep16_scaffold_1924_6
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

comp(10067..10933)
DNA (867bp) protein (289aa)
carboxyvinyl-carboxyphosphonate phosphorylmutase Tax=Desulfospira joergensenii RepID=UPI0003B6088E
carboxyvinyl-carboxyphosphonate phosphorylmutase
Tax=CG_Arma_02
PLM3_30_b2_sep16_scaffold_1924_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(10985..11839)
DNA (855bp) protein (285aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein Tax=Chthoniobacter flavus Ellin428 RepID=B4DBS1_9BACT
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:EDY16100.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
4Fe-4S ferredoxin
PLM3_30_b2_sep16_scaffold_1924_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(11875..12288)
DNA (414bp) protein (138aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4DBS0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY16099.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM3_30_b2_sep16_scaffold_1924_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(12432..13658)
DNA (1227bp) protein (409aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XLS9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF59186.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM3_30_b2_sep16_scaffold_1924_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(13864..14766)
DNA (903bp) protein (301aa)
Putative esterase Tax=Pedosphaera parvula Ellin514 RepID=B9XGK3_9BACT
Putative esterase {ECO:0000313|EMBL:EEF61054.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
esterase
PLM3_30_b2_sep16_scaffold_1924_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

14927..16036
DNA (1110bp) protein (370aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI0002DC48B6
Sulfatase {ECO:0000313|EMBL:EEF59873.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
sulfatase
PLM3_30_b2_sep16_scaffold_1924_12
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

15984..16799
DNA (816bp) protein (272aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI0002DC48B6
sulfatase
Sulfatase {ECO:0000313|EMBL:ADG67353.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
PLM3_30_b2_sep16_scaffold_1924_13
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

16978..18342
DNA (1365bp) protein (455aa)
hypothetical protein Tax=Methylomonas sp. MK1 RepID=UPI000367F425
hypothetical protein
Tax=RBG_16_Planctomycetes_64_12_curated
PLM3_30_b2_sep16_scaffold_1924_14
Methylomonas denitrificans, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18339..19391
DNA (1053bp) protein (351aa)
hypothetical protein Tax=Methylomonas sp. MK1 RepID=UPI00037A2711
Membrane fusion protein MtrC {ECO:0000313|EMBL:KHD30523.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas denitrificans.;"
RND family efflux transporter MFP subunit
PLM3_30_b2_sep16_scaffold_1924_15
Methylomonas denitrificans, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19395..21491
DNA (2097bp) protein (699aa)
acriflavin resistance protein Tax=Methylomonas sp. MK1 RepID=UPI00037CE57D
Acriflavin resistance protein {ECO:0000313|EMBL:KHD30507.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas denitrificans.;"
silver efflux pump
Displaying 15 items

View Taxonomy