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PLM3_30_b2_sep16_scaffold_7694

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_7694_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(2..1765)
DNA (1764bp) protein (588aa)
Immunoglobulin I-set domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XPX6_9BACT
Immunoglobulin I-set domain protein {ECO:0000313|EMBL:EEF58073.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Endonuclease/exonuclease/phosphatase
PLM3_30_b2_sep16_scaffold_7694_2
Pontibacillus marinus, Pontibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2131..2289)
DNA (159bp) protein (53aa)
hypothetical protein Tax=Bacillus sp. ZYK RepID=UPI0003722AE6
Uncharacterized protein {ECO:0000313|EMBL:KGX83832.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Pontibacillus.;" source="Pontibacillus marinus BH030004 = DSM 16465.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_7694_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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2486..3919
DNA (1434bp) protein (478aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
DNA ligase Tax=Pedosphaera parvula Ellin514 RepID=B9XGZ1_9BACT
lig; NAD-dependent DNA ligase
PLM3_30_b2_sep16_scaffold_7694_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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3859..4536
DNA (678bp) protein (226aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ligA; DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) (EC:6.5.1.2)
DNA ligase Tax=Pedosphaera parvula Ellin514 RepID=B9XGZ1_9BACT
PLM3_30_b2_sep16_scaffold_7694_5
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(5023..5430)
DNA (408bp) protein (136aa)
hypothetical protein Tax=Gemmata obscuriglobus RepID=UPI00016C49CD
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA29050.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Displaying 5 items

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