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PLM3_30_b2_sep16_scaffold_3082

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_3082_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(3..599)
DNA (597bp) protein (199aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XE28_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF61919.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_3082_2
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

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comp(596..967)
DNA (372bp) protein (124aa)
sulfate transporter subunit Tax=Comamonas sp. B-9 RepID=UPI000395BB7D
sulfate transporter subunit
Sulfate transporter subunit {ECO:0000313|EMBL:AKC82841.1}; species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
PLM3_30_b2_sep16_scaffold_3082_3
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(909..1511)
DNA (603bp) protein (201aa)
Sulfate ABC transporter, periplasmic sulfate-binding protein Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y6N0_LEPCP
Sulfate transport protein (ABC superfamily,peri_bind) {ECO:0000313|EMBL:CDI00873.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
sulfate ABC transporter substrate-binding protein
PLM3_30_b2_sep16_scaffold_3082_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(1542..3008)
DNA (1467bp) protein (489aa)
Phosphate-selective porin O and P Tax=Pedosphaera parvula Ellin514 RepID=B9XF68_9BACT
Phosphate-selective porin O and P {ECO:0000313|EMBL:EEF61566.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
oprP; phosphate-selective porin o and p
PLM3_30_b2_sep16_scaffold_3082_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(3082..3273)
DNA (192bp) protein (64aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XE29_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF61920.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_3082_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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3420..3887
DNA (468bp) protein (156aa)
Transcriptional regulator, BadM/Rrf2 family Tax=Pedosphaera parvula Ellin514 RepID=B9XE30_9BACT
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:EEF61921.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
BadM/Rrf2 family transcriptional regulator
PLM3_30_b2_sep16_scaffold_3082_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(3941..4870)
DNA (930bp) protein (310aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Lipoyl synthase Tax=Pedosphaera parvula Ellin514 RepID=B9XM87_9BACT
lipoate synthase
PLM3_30_b2_sep16_scaffold_3082_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(4884..5141)
DNA (258bp) protein (86aa)
glutaredoxin Tax=Verrucomicrobium spinosum RepID=UPI000174585B
Glutaredoxin {ECO:0000313|EMBL:EEF59081.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
glutaredoxin
PLM3_30_b2_sep16_scaffold_3082_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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5350..6060
DNA (711bp) protein (237aa)
Short-chain dehydrogenase/reductase SDR Tax=Pedosphaera parvula Ellin514 RepID=B9XKJ5_9BACT
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EEF59665.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
putative 3-oxoacyl-(acyl-carrier-protein) reductase 1
PLM3_30_b2_sep16_scaffold_3082_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(6150..6740)
DNA (591bp) protein (197aa)
Membrane-bound dehydrogenase domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XM42_9BACT
Membrane-bound dehydrogenase domain protein {ECO:0000313|EMBL:EEF59035.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
membrane-bound dehydrogenase
Displaying 10 items

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