ggKbase home page

PLM3_30_b2_sep16_scaffold_348

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_348_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

2..544
DNA (543bp) protein (181aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4DBK7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY16194.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_348_2
R_OP11_Gottesmanbacteria_39_11, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

907..2673
DNA (1767bp) protein (589aa)
PA14 domain protein Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4W3S7_9CYAN
PA14 domain-containing protein
Tax=RIFCSPHIGHO2_02_FULL_OP11_Gottesmanbacteria_39_11_curated
PLM3_30_b2_sep16_scaffold_348_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(2684..3424)
DNA (741bp) protein (247aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XI44_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF60537.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_348_4
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(3479..5326)
DNA (1848bp) protein (616aa)
Tax=GWF2_Lentisphaerae_44_16_curated
PLM3_30_b2_sep16_scaffold_348_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

5688..6788
DNA (1101bp) protein (367aa)
gck1; Gck (EC:2.7.1.45)
PfkB domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XCY9_9BACT
PfkB domain protein {ECO:0000313|EMBL:EEF62335.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM3_30_b2_sep16_scaffold_348_6
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

6893..7654
DNA (762bp) protein (254aa)
id=2778479 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Tax=GWF2_Lentisphaerae_50_93_curated
PLM3_30_b2_sep16_scaffold_348_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

7790..10843
DNA (3054bp) protein (1018aa)
Immunoglobulin I-set domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XJN0_9BACT
Immunoglobulin I-set domain protein {ECO:0000313|EMBL:EEF59906.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Ricin B lectin
PLM3_30_b2_sep16_scaffold_348_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(11413..12741)
DNA (1329bp) protein (443aa)
Oxidoreductase domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XK65_9BACT
Oxidoreductase domain protein {ECO:0000313|EMBL:EEF59703.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
oxidoreductase domain-containing protein
PLM3_30_b2_sep16_scaffold_348_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(13427..13861)
DNA (435bp) protein (145aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XGP0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF61091.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM3_30_b2_sep16_scaffold_348_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

14041..14883
DNA (843bp) protein (281aa)
ParB-like partition protein Tax=Pedosphaera parvula Ellin514 RepID=B9XGP1_9BACT
ParB-like partition protein {ECO:0000313|EMBL:EEF61092.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
parB-like partition protein
PLM3_30_b2_sep16_scaffold_348_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

15066..15419
DNA (354bp) protein (118aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XGP2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF61093.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_348_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

15419..16111
DNA (693bp) protein (231aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XGP2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF61093.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_348_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

16131..16715
DNA (585bp) protein (195aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Peptide deformylase Tax=Pedosphaera parvula Ellin514 RepID=B9XGP3_9BACT
peptide deformylase
PLM3_30_b2_sep16_scaffold_348_14
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

17157..18005
DNA (849bp) protein (283aa)
PA14 domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XKF0_9BACT
PA14 domain protein {ECO:0000313|EMBL:EEF59620.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Displaying 14 items

View Taxonomy