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PLM3_30_b2_sep16_scaffold_363

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_363_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(3..836)
DNA (834bp) protein (278aa)
Xanthine dehydrogenase, molybdopterin binding subunit Tax=Pedosphaera parvula Ellin514 RepID=B9XKZ3_9BACT
Xanthine dehydrogenase, molybdopterin binding subunit {ECO:0000313|EMBL:EEF59487.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
molybdopterin dehydrogenase FAD-binding protein
PLM3_30_b2_sep16_scaffold_363_2
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(1416..2153)
DNA (738bp) protein (246aa)
Nicotinamidase-like amidase Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGQ0_SINAD
nicotinamidase-like amidase
Nicotinamidase-like amidase {ECO:0000313|EMBL:AGA27983.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM3_30_b2_sep16_scaffold_363_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(2595..3017)
DNA (423bp) protein (141aa)
Rhodanese domain protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D6G2_9BACT
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Rhodanese-related sulfurtransferase
PLM3_30_b2_sep16_scaffold_363_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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3452..3979
DNA (528bp) protein (176aa)
Translation elongation factor P Tax=Pedosphaera parvula Ellin514 RepID=B9XCX2_9BACT
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
elongation factor P
PLM3_30_b2_sep16_scaffold_363_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(4119..4502)
DNA (384bp) protein (128aa)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000256|HAMAP-Rule:MF_01394}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
NADH-quinone oxidoreductase subunit A Tax=Pedosphaera parvula Ellin514 RepID=B9XFY1_9BACT
NADH dehydrogenase I subunit A
PLM3_30_b2_sep16_scaffold_363_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(4512..4784)
DNA (273bp) protein (91aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XFY2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF61144.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_363_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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5302..5613
DNA (312bp) protein (104aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XD59_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF62005.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_363_8
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

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5804..7558
DNA (1755bp) protein (585aa)
gamma-glutamyltransferase 1. Threonine peptidase. MEROPS family T03 (EC:2.3.2.2)
Gamma-glutamyltransferase Tax=Chthoniobacter flavus Ellin428 RepID=B4D9T0_9BACT
Tax=RBG_16_Planctomycetes_64_12_curated
PLM3_30_b2_sep16_scaffold_363_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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7772..9496
DNA (1725bp) protein (575aa)
hypothetical protein bin=CNBR_ACIDO species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncharacterized protein {ECO:0000313|EMBL:EEF61147.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_363_10
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(10060..12135)
DNA (2076bp) protein (692aa)
alkaline phosphatase Tax=Hymenobacter norwichensis RepID=UPI0003B33420
putative phosphohydrolase
Tax=CG_Anaero_03
PLM3_30_b2_sep16_scaffold_363_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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12738..14393
DNA (1656bp) protein (552aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
phosphomethylpyrimidine synthase Tax=Verrucomicrobium spinosum RepID=UPI00017455F9
thiamine biosynthesis protein ThiC
Displaying 11 items

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