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PLM3_30_b2_sep16_scaffold_455

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_455_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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2..610
DNA (609bp) protein (203aa)
Glycosyl transferase group 1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPY3_9BACT
Glycosyl transferase group 1 {ECO:0000313|EMBL:EEF58080.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_455_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(899..1546)
DNA (648bp) protein (216aa)
Two component transcriptional regulator, LuxR family Tax=Pedosphaera parvula Ellin514 RepID=B9XH98_9BACT
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EEF60733.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
two component LuxR family transcriptional regulator
PLM3_30_b2_sep16_scaffold_455_3
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1524..5255)
DNA (3732bp) protein (1244aa)
Multi-sensor signal transduction histidine kinase Tax=Pedosphaera parvula Ellin514 RepID=B9XJ88_9BACT
PAS domain-containing protein
Tax=GWC2_Geobacteraceae_58_44_curated
PLM3_30_b2_sep16_scaffold_455_4
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5482..6663)
DNA (1182bp) protein (394aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI000375F5DE
internalin-A
Internalin-A, putative {ECO:0000313|EMBL:AEB67377.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC; 103675 / OCM 69 / GP-6) (Methanothrix concilii).;"
PLM3_30_b2_sep16_scaffold_455_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(7053..9347)
DNA (2295bp) protein (765aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XDS8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF62224.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
internalin-A
PLM3_30_b2_sep16_scaffold_455_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(9430..11262)
DNA (1833bp) protein (611aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XDS8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF62224.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_455_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(11358..12068)
DNA (711bp) protein (237aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D565_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18270.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM3_30_b2_sep16_scaffold_455_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(12081..13043)
DNA (963bp) protein (321aa)
Metallophosphoesterase Tax=Chthoniobacter flavus Ellin428 RepID=B4D564_9BACT
Metallophosphoesterase {ECO:0000313|EMBL:EDY18269.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
metallophosphoesterase
PLM3_30_b2_sep16_scaffold_455_9
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13078..13383)
DNA (306bp) protein (102aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003610F03
hypothetical protein
PLM3_30_b2_sep16_scaffold_455_10
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13494..14669)
DNA (1176bp) protein (392aa)
Uncharacterized protein Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q221A4_RHOFD
Uncharacterized protein {ECO:0000313|EMBL:GAO39124.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_455_11
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15271..15699)
DNA (429bp) protein (143aa)
hisitidine kinase Tax=Verrucomicrobium spinosum RepID=UPI0001744B1D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK60027.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
PLM3_30_b2_sep16_scaffold_455_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(15696..15917)
DNA (222bp) protein (74aa)
Metallophosphoesterase Tax=Pedosphaera parvula Ellin514 RepID=B9XRM9_9BACT
Metallophosphoesterase {ECO:0000313|EMBL:EEF57500.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
metallophosphoesterase
PLM3_30_b2_sep16_scaffold_455_13
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(15952..16170)
DNA (219bp) protein (73aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PGW1_9BACT
hypothetical protein
Displaying 13 items

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