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PLM3_30_b2_sep16_scaffold_490

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_490_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(3..812)
DNA (810bp) protein (270aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XMT3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF58858.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
polyprenyl-phospho-glycoside--protein O-glycosyltransferase
PLM3_30_b2_sep16_scaffold_490_2
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(1211..1747)
DNA (537bp) protein (179aa)
Protein containing RNA polymerase sigma-70 domain protein Tax=Rhodopirellula baltica SH28 RepID=K5D653_RHOBT
Protein containing RNA polymerase sigma-70 domain protein {ECO:0000313|EMBL:EKK02202.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica SH28.;"
sigH; sigma factor SigH
PLM3_30_b2_sep16_scaffold_490_3
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2098..3093)
DNA (996bp) protein (332aa)
enediyne biosynthesis protein UnbU Tax=Methylomicrobium buryatense RepID=UPI000349EEEC
unbU; enediyne biosynthesis protein UnbU
Enediyne biosynthesis protein UnbU {ECO:0000313|EMBL:CCE23293.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM; B-2133 / 20Z).;"
PLM3_30_b2_sep16_scaffold_490_4
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(3090..5009)
DNA (1920bp) protein (640aa)
ASPIC/UnbV domain protein Tax=Cyanothece sp. (strain PCC 7822) RepID=E0U573_CYAP2
ASPIC/UnbV domain-containing protein
ASPIC/UnbV domain protein {ECO:0000313|EMBL:ADN12352.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7822).;"
PLM3_30_b2_sep16_scaffold_490_5
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5085..5810)
DNA (726bp) protein (242aa)
Putative peroxidase, selenocysteine-containing Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D797_MYXXD
peroxidase
Putative peroxidase, selenocysteine-containing {ECO:0000313|EMBL:ABF88022.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
PLM3_30_b2_sep16_scaffold_490_6
unknown

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comp(6042..6158)
DNA (117bp) protein (39aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_490_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

6302..6883
DNA (582bp) protein (194aa)
Transcriptional regulator, TetR family Tax=Pedosphaera parvula Ellin514 RepID=B9XMU4_9BACT
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEF58869.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
TetR family transcriptional regulator
PLM3_30_b2_sep16_scaffold_490_8
unknown

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6944..7258
DNA (315bp) protein (105aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_490_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

7304..8482
DNA (1179bp) protein (393aa)
Efflux transporter, RND family, MFP subunit Tax=Pedosphaera parvula Ellin514 RepID=B9XMU6_9BACT
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EEF58871.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
membrane protein
PLM3_30_b2_sep16_scaffold_490_10
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8526..8846)
DNA (321bp) protein (107aa)
hypothetical protein Tax=Synechococcus sp. CB0101 RepID=UPI00020012CB
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3_30_b2_sep16_scaffold_490_11
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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comp(8843..9109)
DNA (267bp) protein (89aa)
hypothetical protein
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Synechococcus sp. RS9917 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3_30_b2_sep16_scaffold_490_12
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

9179..12382
DNA (3204bp) protein (1068aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter Tax=Opitutaceae bacterium TAV1 RepID=I6B3E3_9BACT
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter {ECO:0000313|EMBL:EIQ01785.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
transporter
PLM3_30_b2_sep16_scaffold_490_13
unknown

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12400..12633
DNA (234bp) protein (78aa)

This feature has no annotations

Displaying 13 items

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