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PLM3_30_b2_sep16_scaffold_520

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_520_1
unknown

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comp(1..321)
DNA (321bp) protein (107aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_520_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(700..1317)
DNA (618bp) protein (206aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XS66_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF57321.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_520_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(1349..2545)
DNA (1197bp) protein (399aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D3A4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY19215.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
glycosyl hydrolase
PLM3_30_b2_sep16_scaffold_520_4
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2616..4442)
DNA (1827bp) protein (609aa)
hypothetical protein Tax=Proteiniphilum acetatigenes RepID=UPI000364CDF3
Peptidase S41 {ECO:0000313|EMBL:KGJ88323.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (Vibrio psychroerythus).;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_520_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

4585..5586
DNA (1002bp) protein (334aa)
Magnesium and cobalt transport protein CorA Tax=Pedosphaera parvula Ellin514 RepID=B9XR33_9BACT
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
magnesium transporter
PLM3_30_b2_sep16_scaffold_520_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

5694..6944
DNA (1251bp) protein (417aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Signal transduction histidine kinase, nitrogen specific, NtrB Tax=Pedosphaera parvula Ellin514 RepID=B9XR32_9BACT
histidine kinase
PLM3_30_b2_sep16_scaffold_520_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(7161..8162)
DNA (1002bp) protein (334aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
quinolinate synthetase complex subunit A (EC:2.1.1.63)
Quinolinate synthase A Tax=Pedosphaera parvula Ellin514 RepID=B9XIB7_9BACT
PLM3_30_b2_sep16_scaffold_520_8
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(8194..9003)
DNA (810bp) protein (270aa)
Tax=RBG_13_Planctomycetes_62_9_curated
PLM3_30_b2_sep16_scaffold_520_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(9008..9604)
DNA (597bp) protein (199aa)
NADPH-dependent FMN reductase Tax=Pedosphaera parvula Ellin514 RepID=B9XIB3_9BACT
NADPH-dependent FMN reductase {ECO:0000313|EMBL:EEF60374.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
putative flavoprotein
PLM3_30_b2_sep16_scaffold_520_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

9726..10643
DNA (918bp) protein (306aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XQ18_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF58022.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM3_30_b2_sep16_scaffold_520_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

10659..11504
DNA (846bp) protein (282aa)
Aminodeoxychorismate lyase Tax=Pedosphaera parvula Ellin514 RepID=B9XIW9_9BACT
Aminodeoxychorismate lyase {ECO:0000313|EMBL:EEF60196.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
class IV aminotransferase
PLM3_30_b2_sep16_scaffold_520_12
Arthrospira sp. PCC 8005, Arthrospira, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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11752..14241
DNA (2490bp) protein (830aa)
Putative Subtilisin {ECO:0000313|EMBL:CCE20711.1}; EC=3.4.21.62 {ECO:0000313|EMBL:CCE20711.1};; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Arthrospira.;" source="Arthrospira sp. PCC 8005.;"
Putative Subtilisin Tax=Arthrospira sp. PCC 8005 RepID=H1WMC9_9CYAN
hypothetical protein
PLM3_30_b2_sep16_scaffold_520_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(14370..15131)
DNA (762bp) protein (254aa)
NIPSNAP family containing protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D929_9BACT
NIPSNAP family containing protein {ECO:0000313|EMBL:EDY17074.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
NIPSNAP family containing protein
PLM3_30_b2_sep16_scaffold_520_14

Not on your lists

comp(15445..19779)
DNA (4335bp) protein (1445aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-N20 RepID=UPI000373F83E
Uncharacterized protein {ECO:0000313|EMBL:KKL91608.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
spore coat protein CotH
PLM3_30_b2_sep16_scaffold_520_15
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

comp(19963..22698)
DNA (2736bp) protein (912aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI0003625F5A
spore coat protein CotH
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
PLM3_30_b2_sep16_scaffold_520_16
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(22763..25348)
DNA (2586bp) protein (862aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI0003625F5A
hypothetical protein
Tax=RBG_13_Planctomycetes_50_24_curated
Displaying 16 items

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