ggKbase home page

PLM3_30_b2_sep16_scaffold_585

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_585_1
Winogradskyella sp. PG-2, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(374..1405)
DNA (1032bp) protein (344aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI000377B7A9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO77358.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Winogradskyella.;" source="Winogradskyella sp. PG-2.;"
PLM3_30_b2_sep16_scaffold_585_2
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1426..2772)
DNA (1347bp) protein (449aa)
Pyrrolo-quinoline quinone repeat-containing protein Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0STC7_PLABD
pyrrolo-quinoline quinone repeat-containing protein
Pyrrolo-quinoline quinone repeat-containing protein {ECO:0000313|EMBL:ADY60389.1}; Flags: Precursor;; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
PLM3_30_b2_sep16_scaffold_585_3
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(2804..4900)
DNA (2097bp) protein (699aa)
Uncharacterized protein Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DHD4_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA28779.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM3_30_b2_sep16_scaffold_585_4
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(4964..5998)
DNA (1035bp) protein (345aa)
Ribosomal small subunit Rsm22 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZW90_OPITP
ribosomal small subunit Rsm22
Ribosomal small subunit Rsm22 {ECO:0000313|EMBL:ACB76842.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM3_30_b2_sep16_scaffold_585_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

6115..7110
DNA (996bp) protein (332aa)
Transmembrane protein Tax=Pedosphaera parvula Ellin514 RepID=B9XN70_9BACT
Transmembrane protein {ECO:0000313|EMBL:EEF58732.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_585_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

7156..9042
DNA (1887bp) protein (629aa)
Oxidoreductase domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XN71_9BACT
Oxidoreductase domain protein {ECO:0000313|EMBL:EEF58733.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
oxidoreductase domain protein
PLM3_30_b2_sep16_scaffold_585_7
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(8984..10420)
DNA (1437bp) protein (479aa)
N-acetylgalactosamine-6-sulfatase (EC:3.1.6.4)
Sulfatase Tax=Pedosphaera parvula Ellin514 RepID=B9XF83_9BACT
Tax=RBG_13_Planctomycetes_50_24_curated
PLM3_30_b2_sep16_scaffold_585_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

10699..11349
DNA (651bp) protein (217aa)
Colicin V production protein Tax=Pedosphaera parvula Ellin514 RepID=B9XFW5_9BACT
Colicin V production protein {ECO:0000313|EMBL:EEF61127.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM3_30_b2_sep16_scaffold_585_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

11371..13164
DNA (1794bp) protein (598aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
DNA primase Tax=Pedosphaera parvula Ellin514 RepID=B9XFW4_9BACT
dnaG; DNA primase
PLM3_30_b2_sep16_scaffold_585_10
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13362..14930)
DNA (1569bp) protein (523aa)
Chloride peroxidase Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3YZW8_DESAF
chloride peroxidase
Chloride peroxidase {ECO:0000313|EMBL:EGJ50923.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus str. Walvis Bay.;"
PLM3_30_b2_sep16_scaffold_585_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(15246..15872)
DNA (627bp) protein (209aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XRN3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF57504.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Displaying 11 items

View Taxonomy