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PLM3_30_b2_sep16_scaffold_677

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_677_1
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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2..2479
DNA (2478bp) protein (826aa)
RNA polymerase sigma factor, sigma-70 family Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DFV7_SINAD
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA27703.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM3_30_b2_sep16_scaffold_677_2
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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comp(2534..2851)
DNA (318bp) protein (106aa)
Transcriptional modulator of MazE/toxin, MazF bin=GWF2_Lentisphaerae_57_35 species=Microcystis aeruginosa genus=Microcystis taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein
Tax=GWF2_Lentisphaerae_57_35_curated
PLM3_30_b2_sep16_scaffold_677_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(2851..3003)
DNA (153bp) protein (51aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4DAP1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY16559.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM3_30_b2_sep16_scaffold_677_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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3291..3701
DNA (411bp) protein (137aa)
30S ribosomal protein S12 Tax=Pedosphaera parvula Ellin514 RepID=B9XFN5_9BACT
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
30S ribosomal protein S12
PLM3_30_b2_sep16_scaffold_677_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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3757..4140
DNA (384bp) protein (128aa)
30S ribosomal protein S7 Tax=Pedosphaera parvula Ellin514 RepID=B9XFN4_9BACT
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
rpsG; 30S ribosomal protein S7
PLM3_30_b2_sep16_scaffold_677_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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4207..6402
DNA (2196bp) protein (732aa)
Elongation factor G Tax=Pedosphaera parvula Ellin514 RepID=B9XFN3_9BACT
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
fusA; translation elongation factor G, GTPase
PLM3_30_b2_sep16_scaffold_677_7
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(6900..7838)
DNA (939bp) protein (313aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4CWD5_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
PLM3_30_b2_sep16_scaffold_677_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


8091..8396
DNA (306bp) protein (102aa)
30S ribosomal protein S10 Tax=Pedosphaera parvula Ellin514 RepID=B9XFN2_9BACT
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
rpsJ; 30S ribosomal protein S10
PLM3_30_b2_sep16_scaffold_677_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


8423..9304
DNA (882bp) protein (294aa)
50S ribosomal protein L3 Tax=Pedosphaera parvula Ellin514 RepID=B9XFN1_9BACT
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
50S ribosomal protein L3
PLM3_30_b2_sep16_scaffold_677_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


9311..9934
DNA (624bp) protein (208aa)
50S ribosomal protein L4 Tax=Pedosphaera parvula Ellin514 RepID=B9XFN0_9BACT
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
50S ribosomal protein L4P
PLM3_30_b2_sep16_scaffold_677_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


9949..10230
DNA (282bp) protein (94aa)
50S ribosomal protein L23 Tax=Pedosphaera parvula Ellin514 RepID=B9XFM9_9BACT
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
50S ribosomal protein L23
PLM3_30_b2_sep16_scaffold_677_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(10422..12230)
DNA (1809bp) protein (603aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Glutamine--tRNA ligase Tax=Chthoniobacter flavus Ellin428 RepID=B4D9B1_9BACT
glutaminyl-tRNA synthetase
PLM3_30_b2_sep16_scaffold_677_13
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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12675..12986
DNA (312bp) protein (104aa)
Putative uncharacterized protein Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F6W0_ACIC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACO32667.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
PLM3_30_b2_sep16_scaffold_677_14
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(13019..13702)
DNA (684bp) protein (228aa)
Translation initiation factor IF-3 Tax=Pedosphaera parvula Ellin514 RepID=B9XF40_9BACT
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
translation initiation factor IF-3
PLM3_30_b2_sep16_scaffold_677_15
unknown

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13833..14009
DNA (177bp) protein (59aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_677_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

14006..14842
DNA (837bp) protein (279aa)
Xylulokinase Tax=Pedosphaera parvula Ellin514 RepID=B9XPP3_9BACT
Xylulokinase {ECO:0000313|EMBL:EEF58166.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
xylulokinase
Displaying 16 items

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