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PLM3_30_b2_sep16_scaffold_886

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_886_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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2..400
DNA (399bp) protein (133aa)
ribD1; riboflavin biosynthesis protein RibD (EC:3.5.4.26 1.1.1.193)
Riboflavin biosynthesis protein RibD Tax=Pedosphaera parvula Ellin514 RepID=B9XNZ0_9BACT
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM3_30_b2_sep16_scaffold_886_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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543..1157
DNA (615bp) protein (205aa)
Riboflavin synthase, alpha subunit Tax=Pedosphaera parvula Ellin514 RepID=B9XNY9_9BACT
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:EEF58455.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
riboflavin synthase subunit alpha
PLM3_30_b2_sep16_scaffold_886_3
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1169..1453)
DNA (285bp) protein (95aa)
Membrane protein Tax=Klebsiella pneumoniae RepID=U6T5V3_KLEPN
Hypothetical lipoprotein ygdR {ECO:0000313|EMBL:CDL13857.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae IS46.;"
PLM3_30_b2_sep16_scaffold_886_4
Criblamydia sequanensis, Criblamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(1509..2153)
DNA (645bp) protein (215aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI0003828D3C
Uncharacterized protein {ECO:0000313|EMBL:CDR33257.1}; species="Bacteria; Chlamydiae; Chlamydiales; Criblamydiaceae; Criblamydia.;" source="Criblamydia sequanensis.;"
phosphoglycerate mutase
PLM3_30_b2_sep16_scaffold_886_5
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(2150..2890)
DNA (741bp) protein (247aa)
Uncharacterized protein Tax=Blastopirellula marina DSM 3645 RepID=A3ZMY8_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EAQ82317.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
PF06210 family protein
PLM3_30_b2_sep16_scaffold_886_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(2887..3417)
DNA (531bp) protein (177aa)
Response regulator receiver protein Tax=Pedosphaera parvula Ellin514 RepID=B9XL80_9BACT
Response regulator receiver protein {ECO:0000313|EMBL:EEF59431.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
two component, sigma54 specific, transcriptional regulator, Fis family
PLM3_30_b2_sep16_scaffold_886_7
RBG_13_Deltaproteobacteria_60_28_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3494..4954)
DNA (1461bp) protein (487aa)
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1Y9J6_9DELT
RND efflux system outer membrane lipoprotein
Tax=RBG_13_Deltaproteobacteria_60_28_curated
PLM3_30_b2_sep16_scaffold_886_8
CG_Delta_06, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4947..6335)
DNA (1389bp) protein (463aa)
phosphonate-transporting ATPase (EC:3.6.3.28)
Phosphonate-transporting ATPase Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NC60_DESAR
Tax=CG_Delta_06
PLM3_30_b2_sep16_scaffold_886_9
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(6332..7069)
DNA (738bp) protein (246aa)
phosphonate-transporting ATPase (EC:3.6.3.28)
ABC transporter related protein bin=GWF2_Lentisphaerae_52_8 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
Tax=RBG_13_Planctomycetes_62_9_curated
PLM3_30_b2_sep16_scaffold_886_10
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7097..8461)
DNA (1365bp) protein (455aa)
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1Y9J3_9DELT
RND family efflux transporter MFP subunit
Tax=BJP_IG2069_Desfulfarculales_53_13
PLM3_30_b2_sep16_scaffold_886_11
unknown

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comp(8436..8552)
DNA (117bp) protein (39aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_886_12
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8574..9890)
DNA (1317bp) protein (439aa)
Uncharacterized protein Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3R742_CUPTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAQ70742.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis; (strain LMG 19424)).;"
Displaying 12 items

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