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PLM3_30_b2_sep16_scaffold_444

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_444_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(2..1897)
DNA (1896bp) protein (632aa)
hypothetical protein Tax=Dehalobacter sp. FTH1 RepID=UPI00036FCB1E
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_444_2
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2096..3190)
DNA (1095bp) protein (365aa)
UDP-4-keto-6-deoxy-N-acetylglucosamine4-aminotran sferase Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JRQ4_SACES
UDP-4-keto-6-deoxy-N-acetylglucosamine4-aminotransferase
UDP-4-keto-6-deoxy-N-acetylglucosamine4-aminotran sferase {ECO:0000313|EMBL:CCH27489.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
PLM3_30_b2_sep16_scaffold_444_3
Thermofilum sp. 1807-2, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(3187..3768)
DNA (582bp) protein (194aa)
Transferase hexapeptide repeat containing protein Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RYL6_THEPD
Acetyltransferase {ECO:0000313|EMBL:AKG38825.1}; species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum sp. 1807-2.;"
hexapaptide repeat-containing transferase
PLM3_30_b2_sep16_scaffold_444_4
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3755..4825)
DNA (1071bp) protein (357aa)
Sulfotransferase Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y5M1_THEBD
sulfotransferase
Sulfotransferase {ECO:0000313|EMBL:ADG87367.1}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM3_30_b2_sep16_scaffold_444_5
Lyngbya sp. PCC 8106, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(4815..5738)
DNA (924bp) protein (308aa)
Uncharacterized protein Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YR08_LYNSP
Uncharacterized protein {ECO:0000313|EMBL:EAW36463.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya sp. (strain PCC 8106) (Lyngbya aestuarii (strain CCY9616)).;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_444_6
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5735..6718)
DNA (984bp) protein (328aa)
Sulfotransferase Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y5M1_THEBD
sulfotransferase
Sulfotransferase {ECO:0000313|EMBL:ADG87367.1}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM3_30_b2_sep16_scaffold_444_7
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

comp(6718..7980)
DNA (1263bp) protein (421aa)
glgA1; glycogen synthase (EC:2.4.1.21)
Glycogen synthase Tax=Sorangium cellulosum (strain So ce56) RepID=A9GV48_SORC5
Tax=RBG_16_Caldithrix_48_16_curated
PLM3_30_b2_sep16_scaffold_444_8
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7982..9136)
DNA (1155bp) protein (385aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085804}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00301};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00301};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085809};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
homoserine kinase (EC:2.7.1.39)
Homoserine kinase Tax=Caulobacter crescentus OR37 RepID=R0D4J6_CAUCE
PLM3_30_b2_sep16_scaffold_444_9
unknown

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comp(9133..9984)
DNA (852bp) protein (284aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_444_10
Tolypothrix sp. PCC 7601, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(9974..11530)
DNA (1557bp) protein (519aa)
Putative uncharacterized protein Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KBE7_NITWC
Putative dTMP kinase {ECO:0000313|EMBL:EKF00553.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix sp. PCC 7601.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_444_11
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11744..13087)
DNA (1344bp) protein (448aa)
Dystroglycan-type cadherin-like domain repeat protein Tax=Geobacter sulfurreducens RepID=D7AL53_GEOSK
dystroglycan-type cadherin-like protein
Dystroglycan-type cadherin-like domain repeat protein {ECO:0000313|EMBL:AAR35449.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA).;"
PLM3_30_b2_sep16_scaffold_444_12
unknown

Not on your lists

13345..13611
DNA (267bp) protein (89aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_444_13
unknown

Not on your lists

14177..14443
DNA (267bp) protein (89aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_444_14
GWC2_SYX_53_9_curated, Bacteria

Not on your lists

comp(14489..16540)
DNA (2052bp) protein (684aa)
Putative uncharacterized protein Tax=Gordonia polyisoprenivorans NBRC 16320 RepID=H0RH37_9ACTO
beta-glucan endohydrolase
Tax=GWC2_SYX_53_9_curated
PLM3_30_b2_sep16_scaffold_444_15
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

16678..16980
DNA (303bp) protein (101aa)
10 kDa chaperonin Tax=Frankia RepID=I9A3U9_9ACTO
groES; co-chaperonin GroES
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_444_16
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

17051..18667
DNA (1617bp) protein (539aa)
60 kDa chaperonin Tax=Candidatus Microthrix parvicella RN1 RepID=R4YZL1_9ACTN
groEL; chaperonin GroEL
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Displaying 16 items

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