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PLM3-1_50_b1_sep16_scaffold_135

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_135_1
unknown

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comp(2..274)
DNA (273bp) protein (91aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_135_2
unknown

Not on your lists

442..813
DNA (372bp) protein (124aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_135_3
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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1251..1796
DNA (546bp) protein (182aa)
DNA methylase N-4/N-6 domain-containing protein (EC:2.1.1.113)
DNA methylase N-4/N-6 domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM87_NITGG
Tax=RBG_16_Thaumarchaeota_49_8_curated
PLM3-1_50_b1_sep16_scaffold_135_4
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1932..2843
DNA (912bp) protein (304aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AS47_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83572.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_135_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(2905..3174)
DNA (270bp) protein (90aa)
Thioredoxin Tax=mine drainage metagenome RepID=T1A1B8_9ZZZZ
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM3-1_50_b1_sep16_scaffold_135_6
unknown

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comp(3353..3835)
DNA (483bp) protein (161aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_135_7
unknown

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comp(4110..5105)
DNA (996bp) protein (332aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_135_8
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5461..6096
DNA (636bp) protein (212aa)
nfi; endonuclease V (EC:3.1.21.7)
Endonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; EC=3.1.21.7 {ECO:0000256|HAMAP-Rule:MF_00801};; Deoxyinosine 3'endonuclease {ECO:0000256|HAMAP-Rule:MF_00801}; Deoxyribonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
nfi; endonuclease V (EC:3.1.21.7) bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
PLM3-1_50_b1_sep16_scaffold_135_9
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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6179..6586
DNA (408bp) protein (136aa)
hypothetical protein; K07227 hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_50_b1_sep16_scaffold_135_10
unknown

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comp(6755..7159)
DNA (405bp) protein (135aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_135_11
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7436..7765
DNA (330bp) protein (110aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILV1_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC15695.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_135_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

7892..8596
DNA (705bp) protein (235aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IER5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58250.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_135_13
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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8899..9702
DNA (804bp) protein (268aa)
ABC uptake transporter, permease protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE00_NITGG
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:AIF85164.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_135_14
Bacillus lehensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(9836..10222)
DNA (387bp) protein (129aa)
DoxX family protein Tax=Paenibacillus sp. HGF5 RepID=F3MCA7_9BACL
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:AIC95550.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus lehensis G1.;"
PLM3-1_50_b1_sep16_scaffold_135_15
unknown

Not on your lists

10604..10807
DNA (204bp) protein (68aa)
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_135_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(11016..11552)
DNA (537bp) protein (179aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IC32_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58911.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_135_17
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

11706..12140
DNA (435bp) protein (145aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I915_NITGG
exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:AIC16185.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_135_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

12401..12793
DNA (393bp) protein (131aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKL7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59027.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_135_19
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(13684..14100)
DNA (417bp) protein (139aa)
Flavin nucleotide binding protein Tax=Thaumarchaeota archaeon N4 RepID=V6AV54_9ARCH
Flavin nucleotide binding protein {ECO:0000313|EMBL:CDI06427.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_135_20

Not on your lists

14293..14916
DNA (624bp) protein (208aa)
O-methyltransferase YrrM {ECO:0000313|EMBL:KHO47754.1}; EC=2.1.1.- {ECO:0000313|EMBL:KHO47754.1};; species="Archaea.;" source="archaeon GW2011_AR5.;"
O-methyltransferase family protein bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
O-methyltransferase family protein
PLM3-1_50_b1_sep16_scaffold_135_21
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(15339..16418)
DNA (1080bp) protein (360aa)
diacylglycerol kinase, catalytic region (EC:2.7.1.107)
Putative diacylglycerol kinase, catalytic region {ECO:0000313|EMBL:AFU59192.1}; EC=2.7.1.107 {ECO:0000313|EMBL:AFU59192.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative diacylglycerol kinase, catalytic region Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKW9_NITGG
PLM3-1_50_b1_sep16_scaffold_135_22
unknown

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comp(16675..16956)
DNA (282bp) protein (94aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_135_23
uncultured crenarchaeote, Crenarchaeota, Archaea

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17174..18355
DNA (1182bp) protein (394aa)
Putative transmembrane protein Tax=uncultured crenarchaeote RepID=Q8NKM7_9CREN
Putative transmembrane protein {ECO:0000313|EMBL:CAD42693.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote.;"
putative esterase of the alpha-beta hydrolase superfamily
PLM3-1_50_b1_sep16_scaffold_135_24
unknown

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comp(18458..19681)
DNA (1224bp) protein (408aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_135_25
unknown

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comp(19749..20111)
DNA (363bp) protein (121aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_135_26
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

20245..20772
DNA (528bp) protein (176aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_50_b1_sep16_scaffold_135_27
unknown

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comp(20966..21835)
DNA (870bp) protein (290aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_135_28
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

22281..22529
DNA (249bp) protein (83aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7H2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57181.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_135_29
unknown

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comp(22480..22596)
DNA (117bp) protein (39aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_135_30
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(22640..24178)
DNA (1539bp) protein (513aa)
permease Tax=Candidatus Nitrosoarchaeum limnia RepID=UPI00026CDFA2
Transporter, major facilitator family protein {ECO:0000313|EMBL:EPA05756.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia BG20.;"
major facilitator superfamily transporter
Displaying items 1-30 of 76 in total

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