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PLM3-1_50_b1_sep16_scaffold_799

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_799_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2..721)
DNA (720bp) protein (240aa)
Putative iron/lead transporter Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I8R4_NITGG
iron/lead transporter
Putative iron/lead transporter {ECO:0000313|EMBL:AFU57666.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_799_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(917..2866)
DNA (1950bp) protein (650aa)
Amino acid permease Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIT1_NITGG
amino acid permease
Amino acid permease {ECO:0000313|EMBL:AFU59865.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_799_3
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2805..3104)
DNA (300bp) protein (100aa)
Amino acid permease Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIT1_NITGG
amino acid transporter
Amino acid transporter {ECO:0000313|EMBL:AIF82929.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_799_4
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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3235..4065
DNA (831bp) protein (277aa)
short-chain dehydrogenase/reductase SDR bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
PF08643 family protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_50_b1_sep16_scaffold_799_5
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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5785..6003
DNA (219bp) protein (73aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AVX0_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJM91557.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. D3C.;"
PLM3-1_50_b1_sep16_scaffold_799_6
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6509..7546
DNA (1038bp) protein (346aa)
atpC; archaeal A1A0-type ATP synthase, subunit C (EC:3.6.3.14)
Archaeal A1A0-type ATP synthase, subunit C {ECO:0000313|EMBL:AIC16557.1}; EC=3.6.3.14 {ECO:0000313|EMBL:AIC16557.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Archaeal A1A0-type ATP synthase, subunit C Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFG7_NITGG
PLM3-1_50_b1_sep16_scaffold_799_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7641..9734)
DNA (2094bp) protein (698aa)
atpI; archaeal A1A0-type ATP synthase, subunit I (EC:3.6.3.14)
Archaeal A1A0-type ATP synthase, subunit I Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJB3_NITGG
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_799_8
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(9974..10306)
DNA (333bp) protein (111aa)
ATP synthase subunit C (EC:3.6.3.14)
H+transporting two-sector ATPase subunit C; K02124 V-type H+-transporting ATPase subunit K [EC:3.6.3.14] bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Tax=CSP1_1_Thaumarchaeota
PLM3-1_50_b1_sep16_scaffold_799_9
unknown

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comp(10508..10654)
DNA (147bp) protein (49aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_799_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(10673..11317)
DNA (645bp) protein (215aa)
atpD; archaeal A1A0-type ATP synthase, subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL19_NITGG
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_799_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(11334..12665)
DNA (1332bp) protein (444aa)
atpB; archaeal A1A0-type ATP synthase, subunit B (EC:3.6.3.14)
V-type ATP synthase beta chain Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM91_NITGG
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_799_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12715..14499)
DNA (1785bp) protein (595aa)
atpA; archaeal A1A0-type ATP synthase, subunit A (EC:3.6.3.14)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
V-type ATP synthase alpha chain Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFG1_NITGG
PLM3-1_50_b1_sep16_scaffold_799_13
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(14500..15111)
DNA (612bp) protein (204aa)
atpE; archaeal A1A0-type ATP synthase, subunit E (EC:3.6.3.14)
V-type proton ATPase subunit E Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJB0_NITGG
V-type proton ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; V-ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_799_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(15280..15918)
DNA (639bp) protein (213aa)
Putative signal-transduction protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL16_NITGG
signal-transduction protein
Putative signal-transduction protein {ECO:0000313|EMBL:AFU60103.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_799_15
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(15947..17440)
DNA (1494bp) protein (498aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFF7_NITGG
hypothetical protein
Tax=RBG_13_Bathyarchaeota_38_9_curated
PLM3-1_50_b1_sep16_scaffold_799_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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18225..18812
DNA (588bp) protein (196aa)
cbiT; precorrin-6Y C5,15-methyltransferase (EC:2.1.1.-)
Probable cobalt-precorrin-6B C(15)-methyltransferase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00786}; EC=2.1.1.196 {ECO:0000256|HAMAP-Rule:MF_00786};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Probable cobalt-precorrin-6Y C(15)-methyltransferase [decarboxylating] Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL12_NITGG
PLM3-1_50_b1_sep16_scaffold_799_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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18914..19636
DNA (723bp) protein (241aa)
cobI; precorrin-2 C(20)-methyltransferase (EC:2.1.1.130 2.1.1.151)
Precorrin-2 C20-methyltransferase {ECO:0000313|EMBL:AFU60447.1}; EC=2.1.1.130 {ECO:0000313|EMBL:AFU60447.1};; EC=2.1.1.151 {ECO:0000313|EMBL:AFU60447.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Precorrin-2 C20-methyltransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMN9_NITGG
PLM3-1_50_b1_sep16_scaffold_799_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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19629..20417
DNA (789bp) protein (263aa)
cobM; precorrin-4 C(11)-methyltransferase (EC:2.1.1.133)
Precorrin-4 C11-methyltransferase {ECO:0000313|EMBL:AFU60448.1}; EC=2.1.1.133 {ECO:0000313|EMBL:AFU60448.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Precorrin-4 C11-methyltransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILI8_NITGG
PLM3-1_50_b1_sep16_scaffold_799_19
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(20802..21104)
DNA (303bp) protein (101aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IK01_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60450.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_799_20
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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21245..21778
DNA (534bp) protein (178aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGC1_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF82489.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_799_21
unknown

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comp(21902..22159)
DNA (258bp) protein (86aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_799_22
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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22595..22909
DNA (315bp) protein (105aa)
Cupin Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BA32_9ARCH
Cupin 2 conserved barrel domain protein
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:AJW70467.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.;"
PLM3-1_50_b1_sep16_scaffold_799_23

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comp(22977..23318)
DNA (342bp) protein (114aa)
Uncharacterized protein Tax=uncultured archaeon RepID=I3RKH3_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AFK24833.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_799_24

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comp(23353..23862)
DNA (510bp) protein (170aa)
Putative transcriptional regulator PadR-like family protein Tax=uncultured archaeon RepID=I3RKH5_9ARCH
Putative transcriptional regulator PadR-like family protein {ECO:0000313|EMBL:AFK24835.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
PadR-like family transcriptional regulator
Displaying 24 items

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