ggKbase home page

PLM3-1_50_b1_sep16_scaffold_1420

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_1420_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(1..549)
DNA (549bp) protein (183aa)
DNA repair protein RecO Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FD10_CONWI
DNA repair protein RecO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_1420_2
unknown

Not on your lists

comp(549..734)
DNA (186bp) protein (62aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1420_3
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

comp(758..1564)
DNA (807bp) protein (269aa)
Formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
5-hydroxymethyluracil DNA glycosylase Tax=Patulibacter americanus RepID=UPI0003B34F16
Tax=BJP_IG2069_Chloroflexi_70_12
PLM3-1_50_b1_sep16_scaffold_1420_4
Thermobacillus composti, Thermobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1571..2872)
DNA (1302bp) protein (434aa)
Pyrimidine-nucleoside phosphorylase Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EE13_THECK
pyrimidine-nucleoside phosphorylase
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:AGA58057.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Thermobacillus.;" source="Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4).;"
PLM3-1_50_b1_sep16_scaffold_1420_5
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2912..3658)
DNA (747bp) protein (249aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00035C9B00
Uncharacterized protein {ECO:0000313|EMBL:AKH83423.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
ABC transporter
PLM3-1_50_b1_sep16_scaffold_1420_6
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3741..4673)
DNA (933bp) protein (311aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000382DC3E
lantibiotic transport ATP-binding protein
Lantibiotic transport ATP-binding protein {ECO:0000313|EMBL:ADI08692.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
PLM3-1_50_b1_sep16_scaffold_1420_7
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4842..6026
DNA (1185bp) protein (395aa)
hypothetical protein Tax=Streptomyces sp. HmicA12 RepID=UPI00035CE5E6
Uncharacterized protein {ECO:0000313|EMBL:EPD64625.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
histidine kinase
PLM3-1_50_b1_sep16_scaffold_1420_8
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6023..6700
DNA (678bp) protein (226aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00036F9C9D
Uncharacterized protein {ECO:0000313|EMBL:EPD64626.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
two component LuxR family transcriptional regulator
PLM3-1_50_b1_sep16_scaffold_1420_9
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6714..7880)
DNA (1167bp) protein (389aa)
phosphopentomutase (EC:5.4.2.7)
hypothetical protein Tax=Desulfurispora thermophila RepID=UPI00035F81A9
Tax=CG_Solirubrobact_01
PLM3-1_50_b1_sep16_scaffold_1420_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8202..9326)
DNA (1125bp) protein (375aa)
Alanine dehydrogenase Tax=Thermus oshimai JL-2 RepID=K7QWF5_THEOS
alanine dehydrogenase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1420_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

9393..9686
DNA (294bp) protein (98aa)
Putative uncharacterized protein Tax=Arthrobacter globiformis NBRC 12137 RepID=H0QGS1_ARTGO
antibiotic biosynthesis monooxygenase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1420_12
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

9800..10087
DNA (288bp) protein (96aa)
Uncharacterized protein Tax=Rhodococcus rhodnii LMG 5362 RepID=R7WP03_9NOCA
lactoylglutathione lyase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_1420_13
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(10116..10217)
DNA (102bp) protein (34aa)
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_1420_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(10214..11167)
DNA (954bp) protein (318aa)
Peptidase dimerization domain protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCZ4_CONWI
peptidase dimerization domain-containing protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1420_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(11225..12742)
DNA (1518bp) protein (506aa)
hypothetical protein Tax=Streptomyces vitaminophilus RepID=UPI0003615DBA
alpha amylase catalytic subunit
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1420_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

12785..13975
DNA (1191bp) protein (397aa)
ABC transporter related protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBT9_CONWI
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADB51354.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_1420_17
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(13972..14889)
DNA (918bp) protein (306aa)
Binding-protein-dependent transport systems inner membrane component Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4S7_SPHTD
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACZ39244.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM3-1_50_b1_sep16_scaffold_1420_18
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(14886..15725)
DNA (840bp) protein (280aa)
Binding-protein-dependent transport systems inner membrane component Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4S8_SPHTD
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACZ39245.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM3-1_50_b1_sep16_scaffold_1420_19
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15868..17199)
DNA (1332bp) protein (444aa)
ABC transporter substrate-binding protein Tax=Sorangium cellulosum So0157-2 RepID=S4Y6H4_SORCE
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AGP38463.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
PLM3-1_50_b1_sep16_scaffold_1420_20
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(17362..18117)
DNA (756bp) protein (252aa)
Uncharacterized protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TBW9_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH89901.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
DNA polymerase beta domain-containing protein
PLM3-1_50_b1_sep16_scaffold_1420_21
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18132..19766)
DNA (1635bp) protein (545aa)
pyrG; CTP synthase (EC:6.3.4.2)
CTP synthase Tax=Patulibacter medicamentivorans RepID=H0E3Q7_9ACTN
Tax=RBG_13_Actinobacteria_63_9_curated
PLM3-1_50_b1_sep16_scaffold_1420_22
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(19815..21470)
DNA (1656bp) protein (552aa)
DNA repair protein RecN Tax=Patulibacter americanus RepID=UPI0003B3A37D
DNA repair protein RecN
Tax=RBG_16_Actinobacteria_67_10_curated
Displaying 22 items

View Taxonomy