ggKbase home page

PLM3-1_50_b1_sep16_scaffold_1677

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_1677_1
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(1..594)
DNA (594bp) protein (198aa)
Glutaryl-CoA dehydrogenase {ECO:0000313|EMBL:EHN11974.1}; EC=1.3.8.6 {ECO:0000313|EMBL:EHN11974.1};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
Glutaryl-CoA dehydrogenase Tax=Patulibacter medicamentivorans RepID=H0E2V7_9ACTN
acyl-CoA dehydrogenase
PLM3-1_50_b1_sep16_scaffold_1677_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

698..1879
DNA (1182bp) protein (394aa)
Acyl-CoA dehydrogenase domain protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F110_CONWI
acyl-CoA dehydrogenase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1677_3
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1882..2448)
DNA (567bp) protein (189aa)
Uncharacterized protein (Fragment) Tax=Actinomadura madurae LIID-AJ290 RepID=U2M6K2_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU00405.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis ATCC 700358.;"
PLM3-1_50_b1_sep16_scaffold_1677_4
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(2423..2926)
DNA (504bp) protein (168aa)
Uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=Nocardia brasiliensis genus=Nocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3-1_50_b1_sep16_scaffold_1677_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

2958..3791
DNA (834bp) protein (278aa)
Short-chain dehydrogenase/reductase SDR Tax=Geobacillus RepID=C9RTF1_GEOSY
short-chain dehydrogenase/reductase SDR
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1677_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

3927..5813
DNA (1887bp) protein (629aa)
VanW family protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SBN5_GEOOG
VanW family protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1677_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(5788..6207)
DNA (420bp) protein (140aa)
Thioesterase superfamily protein Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CWZ6_TRURR
thioesterase superfamily protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1677_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

6463..7119
DNA (657bp) protein (219aa)
Sir2 family transcriptional regulator; K12410 NAD-dependent deacetylase [EC:3.5.1.-] bin=bin9_gal15 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
silent information regulator protein Sir2
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1677_9

Not on your lists

7297..7536
DNA (240bp) protein (80aa)
Uncharacterized protein {ECO:0000313|EMBL:AHG52934.1}; species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
PLM3-1_50_b1_sep16_scaffold_1677_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(7583..8518)
DNA (936bp) protein (312aa)
Putative uncharacterized protein Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5Y507_9FIRM
conserved protein of unknown function BmrU
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1677_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8663..9385)
DNA (723bp) protein (241aa)
purine-nucleoside phosphorylase (EC:2.4.2.1)
Purine-nucleoside phosphorylase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYF1_RUBXD
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1677_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

9460..10242
DNA (783bp) protein (261aa)
N-acetyltransferase GCN5 Tax=Nonomuraea coxensis RepID=UPI00035CE683
N-acetyltransferase GCN5
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1677_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

10246..10890
DNA (645bp) protein (215aa)
Phosphoglycerate mutase Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SED0_INTC7
phosphoglycerate mutase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1677_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

10906..11871
DNA (966bp) protein (322aa)
hypothetical protein Tax=Streptomyces sp. CNQ766 RepID=UPI000364D394
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1677_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

11943..12908
DNA (966bp) protein (322aa)
tilS; tRNA(Ile)-lysidine synthetase (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase Tax=Brachyspira sp. CAG:484 RepID=R5H4N0_9SPIR
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1677_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

12887..13465
DNA (579bp) protein (193aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
hypoxanthine phosphoribosyltransferase Tax=Patulibacter americanus RepID=UPI0003B760F5
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1677_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

13599..13742
DNA (144bp) protein (48aa)
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying 17 items

View Taxonomy