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PLM3-1_50_b1_sep16_scaffold_237

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_237_1
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1311)
DNA (1311bp) protein (437aa)
3-hydroxyacyl-CoA dehydrogenase Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C7T0_DESTA
3-hydroxyacyl-CoA dehydrogenase
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:AFM25621.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
PLM3-1_50_b1_sep16_scaffold_237_2
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(1304..2491)
DNA (1188bp) protein (396aa)
acetyl-CoA acetyltransferase Tax=Actinopolymorpha alba RepID=UPI00037487B5
3-oxoacyl-CoA thiolase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_237_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

2515..3168
DNA (654bp) protein (218aa)
MJ0042 family finger-like protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F4L9_CONWI
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_237_4
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(3187..4008)
DNA (822bp) protein (274aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AW11_FRADG
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_237_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(4031..4858)
DNA (828bp) protein (276aa)
hypothetical protein Tax=Patulibacter americanus RepID=UPI0003B42FF5
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_237_6
R_OD1_Moranbacteria_55_24, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

4917..5528
DNA (612bp) protein (204aa)
hypothetical protein Tax=Fischerella muscicola RepID=UPI00031593B2
methylase
Tax=RIFCSPHIGHO2_01_FULL_OD1_Moranbacteria_55_24_curated
PLM3-1_50_b1_sep16_scaffold_237_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

5569..6882
DNA (1314bp) protein (438aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_237_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

6998..7207
DNA (210bp) protein (70aa)
Cold shock protein CspE Tax=Providencia alcalifaciens RepID=B6XKX0_9ENTR
cold-shock DNA-binding protein family protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_237_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

7269..7490
DNA (222bp) protein (74aa)
Translation initiation factor IF-1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3S5_CONWI
translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_237_10
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7545..8375)
DNA (831bp) protein (277aa)
Extracellular solute-binding protein Tax=Pandoraea sp. SD6-2 RepID=R7X0Z1_9BURK
Extracellular solute-binding protein {ECO:0000313|EMBL:EON12020.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
cysteine ABC transporter substrate-binding protein
PLM3-1_50_b1_sep16_scaffold_237_11
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

8485..9069
DNA (585bp) protein (195aa)
Uncharacterized protein Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGF6_THET1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ42827.1}; species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
PLM3-1_50_b1_sep16_scaffold_237_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

9135..11063
DNA (1929bp) protein (643aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B4J8_STRRD
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_237_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

11060..12079
DNA (1020bp) protein (340aa)
Putative 2-oxoglutarate ferredoxin oxidoreductase subunit beta Tax=Streptomyces viridochromogenes Tue57 RepID=L8PHD1_STRVR
2-oxoglutarate ferredoxin oxidoreductase subunit beta
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_237_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

12159..12698
DNA (540bp) protein (180aa)
transcriptional regulator, PadR family protein Tax=Paenibacillus elgii RepID=UPI000248D7A2
transcriptional regulator, PadR family protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_237_15
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12695..13393
DNA (699bp) protein (233aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00036E5E06
Uncharacterized protein {ECO:0000313|EMBL:EHY87078.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora azurea NA-128.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_237_16
Mycobacterium llatzerense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13368..14258)
DNA (891bp) protein (297aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily Tax=Mycobacterium rhodesiae (strain NBB3) RepID=G8RXG2_MYCRN
Mycobacterium llatzerense strain CLUC14 Mllat_contig000002, whole genome shotgun sequence {ECO:0000313|EMBL:KIU18545.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium llatzerense.;"
alpha/beta hydrolase
PLM3-1_50_b1_sep16_scaffold_237_17
unknown

Not on your lists

14362..14748
DNA (387bp) protein (129aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_237_18
Streptomyces rapamycinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14830..15408
DNA (579bp) protein (193aa)
hypothetical protein Tax=Streptomyces rapamycinicus RepID=UPI000383007A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP60708.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rapamycinicus NRRL 5491.;"
PLM3-1_50_b1_sep16_scaffold_237_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

15381..16418
DNA (1038bp) protein (346aa)
spermidine/putrescine ABC transporter ATP-binding protein Tax=Patulibacter americanus RepID=UPI0003B3C825
Putative ABC transporter ATP-binding protein YdcT
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_237_20
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

16415..17530
DNA (1116bp) protein (372aa)
Potassium transporter Trk Tax=Pseudomonas alcaligenes OT 69 RepID=U3HFL9_PSEAC
putative polyamine ABC transporter substrate-binding protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_237_21
Planktothrix agardhii, Planktothrix, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

17534..18448
DNA (915bp) protein (305aa)
ABC transporter permease Tax=Patulibacter americanus RepID=UPI0003B7726E
PotB {ECO:0000313|EMBL:KEI65914.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Planktothrix.;" source="Planktothrix agardhii NIVA-CYA 126/8.;"
binding-protein-dependent transport systems inner membrane component
PLM3-1_50_b1_sep16_scaffold_237_22
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18445..19266
DNA (822bp) protein (274aa)
spermidine/putrescine ABC transporter permease Tax=Patulibacter americanus RepID=UPI0003B550BB
Spermidine Putrescine ABC transporter permease component potC {ECO:0000313|EMBL:EYD75571.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophilum DSM 19309.;"
binding-protein-dependent transport systems inner membrane component
PLM3-1_50_b1_sep16_scaffold_237_23
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19230..20486)
DNA (1257bp) protein (419aa)
hypothetical protein bin=bin8_Chloro species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
major facilitator superfamily protein
Tax=RBG_13_Actinobacteria_63_9_curated
PLM3-1_50_b1_sep16_scaffold_237_24
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(20483..20926)
DNA (444bp) protein (148aa)
Transcriptional regulator Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZDX9_TERRK
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AFL87447.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63).;"
PLM3-1_50_b1_sep16_scaffold_237_25
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21028..21516
DNA (489bp) protein (163aa)
pyridoxamine 5''''-phosphate oxidase Tax=Saccharopolyspora spinosa RepID=UPI00023791F9
pyridoxamine 5'-phosphate oxidase
Pyridoxamine 5'-phosphate oxidase {ECO:0000313|EMBL:AGM10435.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis HCCB10007.;"
PLM3-1_50_b1_sep16_scaffold_237_26
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(21641..22339)
DNA (699bp) protein (233aa)
Two component transcriptional regulator, winged helix family Tax=Geobacillus RepID=E3IES6_GEOS0
transcriptional regulator
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_237_27
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

22517..23443
DNA (927bp) protein (309aa)
Multi-sensor signal transduction histidine kinase Tax=Chlorobaculum parvum (strain NCIB 8327) RepID=B3QMC5_CHLP8
phoR; phosphate regulon sensor protein PhoR
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_237_28
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

23512..24282
DNA (771bp) protein (257aa)
Phosphate binding protein Tax=Streptomyces davawensis JCM 4913 RepID=K4RCD1_9ACTO
phosphate binding protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_237_29
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

24283..25218
DNA (936bp) protein (312aa)
Phosphate ABC transporter, inner membrane subunit PstC Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RQH3_BLASD
pstC; phosphate ABC transporter, inner membrane subunit PstC
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_237_30
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

25215..26090
DNA (876bp) protein (292aa)
Phosphate ABC transporter, inner membrane subunit PstA Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F813_CONWI
phosphate ABC transporter permease
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying items 1-30 of 39 in total

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