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PLM3-1_50_b1_sep16_scaffold_586

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_586_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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1..1947
DNA (1947bp) protein (649aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH Tax=Patulibacter medicamentivorans RepID=H0E4E5_9ACTN
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_586_2
RLO_RIF02_62_27, RIF2, Bacteria

Not on your lists

comp(1944..3827)
DNA (1884bp) protein (628aa)
hypothetical protein Tax=Dehalobacter sp. FTH1 RepID=UPI000371542A
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
PLM3-1_50_b1_sep16_scaffold_586_3
Nostoc sp. PCC 7107, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(3770..5521)
DNA (1752bp) protein (584aa)
Ig domain protein group 1 domain protein Tax=Nostoc sp. PCC 7107 RepID=K9Q6U4_9NOSO
Ig domain-containing protein group 1 domain-containing protein
Ig domain protein group 1 domain protein {ECO:0000313|EMBL:AFY40834.1}; species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. PCC 7107.;"
PLM3-1_50_b1_sep16_scaffold_586_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(5612..6016)
DNA (405bp) protein (135aa)
Uncharacterized protein Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SN53_NOCSJ
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_586_5
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

6115..6903
DNA (789bp) protein (263aa)
dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F125_CONWI
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_586_6
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

6900..7253
DNA (354bp) protein (118aa)
Dihydroneopterin aldolase Tax=Corynebacterium maris DSM 45190 RepID=S5SX78_9CORY
Dihydroneopterin aldolase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_586_7
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

7253..7711
DNA (459bp) protein (153aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CP19_DESK7
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_586_8
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

7813..8181
DNA (369bp) protein (123aa)
Uncharacterized protein Tax=Propionibacterium sp. oral taxon 192 str. F0372 RepID=S3WSZ4_9ACTO
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_586_9
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(8221..8430)
DNA (210bp) protein (70aa)
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_586_10
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(8555..9103)
DNA (549bp) protein (183aa)
Uncharacterized protein Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NKJ1_MARHT
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_586_11
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

9335..10084
DNA (750bp) protein (250aa)
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=COAX_ACIC1
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_586_12
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10081..10722
DNA (642bp) protein (214aa)
RhtB family transporter Tax=Chelatococcus sp. GW1 RepID=UPI0003165813
RhtB family transporter {ECO:0000313|EMBL:EZQ17557.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
RhtB family transporter
PLM3-1_50_b1_sep16_scaffold_586_13
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10785..11897)
DNA (1113bp) protein (371aa)
tRNA-dihydrouridine synthase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F130_CONWI
dihydrouridine synthase
Tax=RBG_13_Actinobacteria_63_9_curated
PLM3-1_50_b1_sep16_scaffold_586_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

11956..12432
DNA (477bp) protein (159aa)
Transcription elongation factor GreA Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F131_CONWI
transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_586_15
unknown

Not on your lists

comp(12577..13098)
DNA (522bp) protein (174aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_586_16
unknown

Not on your lists

comp(13125..13574)
DNA (450bp) protein (150aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_586_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

13575..16769
DNA (3195bp) protein (1065aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00036CE816
SARP family transcriptional regulator
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_586_18
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16837..18075
DNA (1239bp) protein (413aa)
Uncharacterized protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FB06_VERMA
Uncharacterized protein {ECO:0000313|EMBL:ETK31356.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_586_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

18239..19600
DNA (1362bp) protein (454aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Lysine--tRNA ligase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F132_CONWI
lysyl-tRNA synthetase
PLM3-1_50_b1_sep16_scaffold_586_20
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

19679..21808
DNA (2130bp) protein (710aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ASD1_RUBXD
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) {ECO:0000313|EMBL:ABG05697.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3-1_50_b1_sep16_scaffold_586_21
unknown

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comp(21812..21982)
DNA (171bp) protein (57aa)

This feature has no annotations

Displaying 21 items

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