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PLM3-1_50_b1_sep16_scaffold_786

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_786_1
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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2..532
DNA (531bp) protein (177aa)
Uncharacterized protein Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G1V5_ECHVK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA79492.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
PLM3-1_50_b1_sep16_scaffold_786_trna_1
unknown

Not on your lists

691..765
DNA (75bp)
transferRNA Pro
PLM3-1_50_b1_sep16_scaffold_786_2
unknown

Not on your lists

776..1354
DNA (579bp) protein (193aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_786_3
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

2383..2589
DNA (207bp) protein (69aa)
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_786_4
unknown

Not on your lists

3110..3295
DNA (186bp) protein (62aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_786_5
unknown

Not on your lists

3721..3966
DNA (246bp) protein (82aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_786_6
Nesterenkonia sp. AN1, Nesterenkonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3963..4352
DNA (390bp) protein (130aa)
Glycoside hydrolase family 16 protein Tax=uncultured bacterium RepID=K1Z1W9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EXF25367.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Nesterenkonia.;" source="Nesterenkonia sp. AN1.;"
glycoside hydrolase family 16 protein
PLM3-1_50_b1_sep16_scaffold_786_7
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

4946..5149
DNA (204bp) protein (68aa)
hypothetical protein; K09165 hypothetical protein bin=CNBR_ACIDO species=Maricaulis sp. JL2009 genus=Maricaulis taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_786_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

5201..5989
DNA (789bp) protein (263aa)
hypothetical protein Tax=Methylomicrobium buryatense RepID=UPI000348C4FB
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
PLM3-1_50_b1_sep16_scaffold_786_9
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(5857..7038)
DNA (1182bp) protein (394aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase bin=RBG_19FT_COMBO_GAL15_69_19 species=Methylobacter tundripaludum genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
PLM3-1_50_b1_sep16_scaffold_786_10
Streptomyces sp. 150FB, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7090..8091
DNA (1002bp) protein (334aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI00037B6BE3
Alpha-mannosidase {ECO:0000313|EMBL:KIF73202.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 150FB.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_786_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8085..8648)
DNA (564bp) protein (188aa)
Thioredoxin Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZC5_CONWI
thioredoxin
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_786_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8678..9634)
DNA (957bp) protein (319aa)
Amidohydrolase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYH2_RUBXD
N-formimino-L-glutamate deiminase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_786_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

9774..10319
DNA (546bp) protein (182aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase Tax=Microbacterium sp. B19 RepID=UPI00034B9CFD
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_786_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

10491..10688
DNA (198bp) protein (66aa)
Uncharacterized protein Tax=Patulibacter medicamentivorans RepID=H0EBF0_9ACTN
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_786_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

10685..11125
DNA (441bp) protein (147aa)
FHA domain containing protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZE4_CONWI
FHA domain-containing protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_786_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

11122..11835
DNA (714bp) protein (238aa)
Transcriptional regulator, MerR family Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZE3_CONWI
MerR family transcriptional regulator
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_786_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

11832..12359
DNA (528bp) protein (176aa)
Adenine phosphoribosyltransferase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZE2_CONWI
adenine phosphoribosyltransferase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_786_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

12446..13051
DNA (606bp) protein (202aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_786_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

13122..13313
DNA (192bp) protein (64aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_786_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(13320..13517)
DNA (198bp) protein (66aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_786_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

13855..14778
DNA (924bp) protein (308aa)
uppP; undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZZ19_9ACTN
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_786_22
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

14950..16005
DNA (1056bp) protein (352aa)
RNA polymerase sigma factor Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FA01_CONWI
RpoD subfamily RNA polymerase sigma-70 subunit
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_786_23
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(16022..16948)
DNA (927bp) protein (309aa)
RNA polymerase sigma factor SigA Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MG96_ALKOO
RpoD family RNA polymerase sigma factor
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_786_24
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

17127..17927
DNA (801bp) protein (267aa)
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_786_25
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(17910..18605)
DNA (696bp) protein (232aa)
Putative uncharacterized protein Tax=uncultured bacterium W5-102b RepID=H9BWJ9_9BACT
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_786_26
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

18694..20064
DNA (1371bp) protein (457aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEX1_CONWI
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_786_27
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

20061..20813
DNA (753bp) protein (251aa)
CobB/CobQ domain protein glutamine amidotransferase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEX3_CONWI
CobB/CobQ domain-containing protein glutamine amidotransferase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_786_28
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(20925..21386)
DNA (462bp) protein (154aa)
NUDIX hydrolase Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1AH18_SEBTE
NUDIX hydrolase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_786_29
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(21388..21822)
DNA (435bp) protein (145aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut (EC:3.6.1.23)
deoxyuridine 5''''-triphosphate nucleotidohydrolase Tax=Patulibacter americanus RepID=UPI0003B379B3
Tax=RBG_16_Actinobacteria_67_10_curated
Displaying items 1-30 of 46 in total

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