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PLM3-1_50_b1_sep16_scaffold_810

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_810_1
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..263)
DNA (261bp) protein (87aa)
Uncharacterized protein Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RJK5_BLASD
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:CCG02310.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM3-1_50_b1_sep16_scaffold_810_2
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

372..1766
DNA (1395bp) protein (465aa)
sthA; soluble pyridine nucleotide transhydrogenase (EC:1.6.1.1)
Soluble pyridine nucleotide transhydrogenase {ECO:0000313|EMBL:CAJ64776.1}; EC=1.6.1.1 {ECO:0000313|EMBL:CAJ64776.1};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
Pyridine nucleotide-disulfide oxidoreductase Tax=Actinomadura madurae LIID-AJ290 RepID=U2P9K5_9ACTO
PLM3-1_50_b1_sep16_scaffold_810_3
unknown

Not on your lists

1869..2075
DNA (207bp) protein (69aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_810_4
RLO_PLX_64_10, Bacteria

Not on your lists

comp(2111..2560)
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XFT8_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3-1_50_b1_sep16_scaffold_810_5
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3092..3283
DNA (192bp) protein (64aa)
hypothetical protein Tax=Smaragdicoccus niigatensis RepID=UPI000368F602
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH15850.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
PLM3-1_50_b1_sep16_scaffold_810_6
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3469..4584
DNA (1116bp) protein (372aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SDB5_GEOOG
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:ADB76464.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM3-1_50_b1_sep16_scaffold_810_7
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4590..6365
DNA (1776bp) protein (592aa)
Putative Multicopper oxidase Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RJK9_BLASD
putative Multicopper oxidase
Putative Multicopper oxidase {ECO:0000313|EMBL:CCG02314.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM3-1_50_b1_sep16_scaffold_810_8
Sulfitobacter mediterraneus, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6362..6817
DNA (456bp) protein (152aa)
Uncharacterized protein {ECO:0000313|EMBL:KAJ01753.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter mediterraneus.;"
hypothetical protein bin=GWF1_Burkholderiales_GWF1_66_17 species=Methylobacter tundripaludum genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
PLM3-1_50_b1_sep16_scaffold_810_9
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6902..8248
DNA (1347bp) protein (449aa)
Alpha/beta hydrolase fold protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S8X4_GEOOG
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ADB73617.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM3-1_50_b1_sep16_scaffold_810_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

8997..9572
DNA (576bp) protein (192aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F763_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB48834.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_810_11
R_WOR_2_46_37, WOR-2, Bacteria

Not on your lists

comp(9690..10733)
DNA (1044bp) protein (348aa)
6-phosphofructokinase Tax=Melioribacter roseus (strain P3M) RepID=I7A2Q2_MELRP
phosphofructokinase
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_46_37_curated
PLM3-1_50_b1_sep16_scaffold_810_12
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(10916..11464)
DNA (549bp) protein (183aa)
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_810_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

11625..13184
DNA (1560bp) protein (520aa)
hypothetical protein Tax=Streptomyces prunicolor RepID=UPI000381B12E
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_810_14
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(13241..14038)
DNA (798bp) protein (266aa)
aldehyde dehydrogenase (EC:1.2.1.8)
aldehyde dehydrogenase Tax=Actinopolymorpha alba RepID=UPI00035D4BE0
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_810_15
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(14214..15695)
DNA (1482bp) protein (494aa)
betaine-aldehyde dehydrogenase (EC:1.2.1.8)
Betaine-aldehyde dehydrogenase Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y440_THEBD
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_810_16
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(15695..16633)
DNA (939bp) protein (313aa)
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q7V0_STANL
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_810_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(16988..17869)
DNA (882bp) protein (294aa)
GTPase Era Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAV7_CONWI
GTP-binding protein Era
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_810_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(17973..18347)
DNA (375bp) protein (125aa)
Cytidine deaminase Tax=Selenomonas sp. oral taxon 137 str. F0430 RepID=E4LH93_9FIRM
cytidine deaminase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_810_19
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18493..19212)
DNA (720bp) protein (240aa)
Diacylglycerol kinase/PAP2 family protein Tax=Clostridium perfringens C str. JGS1495 RepID=B1BIJ9_CLOPF
diacylglycerol kinase
Tax=RBG_16_Actinobacteria_64_13_curated
PLM3-1_50_b1_sep16_scaffold_810_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(19209..19637)
DNA (429bp) protein (143aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_810_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(19634..20593)
DNA (960bp) protein (320aa)
PhoH family protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAV5_CONWI
PhoH family protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_810_22
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(20675..21118)
DNA (444bp) protein (148aa)
GatB/Yqey domain protein Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QTB9_PERMH
GatB/Yqey domain protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_810_23
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(21115..21366)
DNA (252bp) protein (84aa)
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_810_24
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(21363..21725)
DNA (363bp) protein (121aa)
Histidine triad (HIT) protein Tax=Nocardioides sp. CF8 RepID=R7XYC0_9ACTO
histidine triad (HIT) protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_810_25
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

comp(21709..22917)
DNA (1209bp) protein (403aa)
RNA modification enzyme, MiaB family Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SFG7_PLABD
MiaB family RNA modification protein
Tax=RBG_16_Planctomycetes_59_8_curated
PLM3-1_50_b1_sep16_scaffold_810_26
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(23061..23738)
DNA (678bp) protein (226aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Ribosomal protein L11 methyltransferase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAV0_CONWI
ribosomal L11 methyltransferase
PLM3-1_50_b1_sep16_scaffold_810_27
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(23768..24904)
DNA (1137bp) protein (379aa)
Chaperone protein DnaJ Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAU9_CONWI
chaperone protein DnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_810_28
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(24910..26007)
DNA (1098bp) protein (366aa)
Heat-inducible transcription repressor hrcA Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAU8_CONWI
heat-inducible transcription repressor HrcA
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_810_29
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26004..27014)
DNA (1011bp) protein (337aa)
Oxygen-independent coproporphyrinogen-III oxidase 1 {ECO:0000313|EMBL:KJL27680.1}; EC=1.3.99.22 {ECO:0000313|EMBL:KJL27680.1};; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
coproporphyrinogen III oxidase anaerobic (EC:1.3.99.22)
Uncharacterized protein Tax=Microbacterium maritypicum MF109 RepID=T5L0C7_9MICO
PLM3-1_50_b1_sep16_scaffold_810_30
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(27270..29060)
DNA (1791bp) protein (597aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Elongation factor 4 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAU4_CONWI
GTP-binding protein LepA
Displaying items 1-30 of 59 in total

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