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PLM3-1_50_b1_sep16_scaffold_835

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_835_1
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..1709)
DNA (1707bp) protein (569aa)
hypothetical protein Tax=Nocardioides sp. Iso805N RepID=UPI00037E795C
Uncharacterized protein {ECO:0000313|EMBL:KHK96435.1}; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
PLM3-1_50_b1_sep16_scaffold_835_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(1770..2042)
DNA (273bp) protein (91aa)
LuxR family transcriptional regulator Tax=Streptomyces violaceoniger RepID=UPI0003C76444
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EDY18327.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
LuxR family two component transcriptional regulator
PLM3-1_50_b1_sep16_scaffold_835_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(2157..3212)
DNA (1056bp) protein (352aa)
Uncharacterized protein Tax=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) RepID=Q5SK84_THET8
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_835_4
unknown

Not on your lists

3406..3591
DNA (186bp) protein (62aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_835_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3624..4244)
DNA (621bp) protein (207aa)
coenzyme F420-0 gamma-glutamyl ligase (EC:6.3.2.-)
F420-0:gamma-glutamyl ligase bin=GWC2_Chloroflexi_73_18 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_835_6
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4364..4981)
DNA (618bp) protein (206aa)
oxidoreductase Tax=Citricoccus sp. CH26A RepID=UPI000255EE1E
Reduced coenzyme F420:NADP oxidoreductase {ECO:0000313|EMBL:EON23969.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
oxidoreductase
PLM3-1_50_b1_sep16_scaffold_835_7
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(4972..5886)
DNA (915bp) protein (305aa)
LPPG:FO 2-phospho-L-lactate transferase Tax=uncultured Acidobacteria bacterium RepID=H5SDD1_9BACT
LPPG:FO 2-phospho-L-lactate transferase {ECO:0000313|EMBL:BAL54167.1}; species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
LPPG:FO 2-phospho-L-lactate transferase
PLM3-1_50_b1_sep16_scaffold_835_8
unknown

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comp(5883..6425)
DNA (543bp) protein (181aa)
hypothetical protein Tax=Micromonospora sp. CNB394 RepID=UPI00038141A6
PLM3-1_50_b1_sep16_scaffold_835_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6597..6881)
DNA (285bp) protein (95aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_835_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(7027..8235)
DNA (1209bp) protein (403aa)
Putative ABC transporter ATP-binding protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZ11_CALAS
putative ABC transporter ATP-binding protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_835_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

8259..9083
DNA (825bp) protein (275aa)
hypothetical protein bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
sulfotransferase family protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_835_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(9046..9717)
DNA (672bp) protein (224aa)
O-antigen export system permease protein RfbD Tax=Patulibacter medicamentivorans RepID=H0E4D6_9ACTN
ABC transporter
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_835_13
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(9885..11312)
DNA (1428bp) protein (476aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00037622BD
aminopeptidase Y
Tax=RBG_16_Chloroflexi_51_16_curated
PLM3-1_50_b1_sep16_scaffold_835_14
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11378..13339
DNA (1962bp) protein (654aa)
glycosyl transferase family protein bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
glycosyltransferase
Tax=BJP_IG2069_Desfulfarculales_53_13
PLM3-1_50_b1_sep16_scaffold_835_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

13336..15522
DNA (2187bp) protein (729aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_835_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(15519..16145)
DNA (627bp) protein (209aa)
hypothetical protein Tax=Streptomyces sp. CNS335 RepID=UPI00036EDE02
type 11 methyltransferase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_835_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(16142..16765)
DNA (624bp) protein (208aa)
Glycosyl transferase family 2 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0U834_CYAP2
family 2 glycosyl transferase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_835_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(16762..17862)
DNA (1101bp) protein (367aa)
Glycosyl transferase group 1 Tax=Patulibacter medicamentivorans RepID=H0E1N5_9ACTN
Glycosyltransferase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_835_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(17859..18827)
DNA (969bp) protein (323aa)
Glycosyl transferase group 1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NRZ3_ROSCS
group 1 glycosyl transferase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_835_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(18824..19249)
DNA (426bp) protein (142aa)
lipB; octanoyltransferase (EC:2.3.1.181)
Octanoyltransferase Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q095W0_STIAD
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_835_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(19273..20349)
DNA (1077bp) protein (359aa)
Glycosyl transferase group 1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7LY84_ACIFD
group 1 glycosyl transferase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_835_22
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(20346..22439)
DNA (2094bp) protein (698aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_835_23
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(22432..23667)
DNA (1236bp) protein (412aa)
Glycosyl transferase, group 1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01T61_SOLUE
group 1 glycosyl transferase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_835_24

Not on your lists

comp(23664..24689)
DNA (1026bp) protein (342aa)
Glycosyl transferase group 1 Tax=Chloroflexus RepID=A9WHU6_CHLAA
Glycosyl transferases group 1 {ECO:0000313|EMBL:AIA11105.1}; Flags: Fragment;; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
group 1 glycosyl transferase
PLM3-1_50_b1_sep16_scaffold_835_25
unknown

Not on your lists

comp(24686..24907)
DNA (222bp) protein (74aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_835_26
Renibacterium salmoninarum, Renibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25132..26202
DNA (1071bp) protein (357aa)
hypothetical protein Tax=Glaciibacter superstes RepID=UPI0003B329C8
glycoside hydrolase family protein
Glycosyl transferase, group 1 family protein {ECO:0000313|EMBL:ABY23079.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Renibacterium.;" source="Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / JCM 11484; / NBRC 15589 / NCIMB 2235).;"
PLM3-1_50_b1_sep16_scaffold_835_27
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(26186..27679)
DNA (1494bp) protein (498aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_835_28
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

27701..28843
DNA (1143bp) protein (381aa)
rfbB1; dTDP-glucose 4-6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase Tax=Halorubrum sp. T3 RepID=UPI00037CDB5F
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_835_29
unknown

Not on your lists

comp(28840..29244)
DNA (405bp) protein (135aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_835_30

Not on your lists

comp(29241..30323)
DNA (1083bp) protein (361aa)
Uncharacterized protein {ECO:0000313|EMBL:AIA11366.1}; Flags: Fragment;; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Putative Glycosyl transferase family 39 bin=GWF2_Lentisphaerae_49_21 species=Microcystis aeruginosa genus=Microcystis taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein
Displaying items 1-30 of 65 in total

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