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PLM3-1_50_b1_sep16_scaffold_903

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_903_1
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

327..917
DNA (591bp) protein (197aa)
Response regulator receiver and ANTAR domain protein Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E2B2_DICTD
response regulator receiver protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_903_2
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

967..1371
DNA (405bp) protein (135aa)
Ca binding protein Tax=Rhodococcus ruber BKS 20-38 RepID=M2ZK19_9NOCA
Ca binding protein {ECO:0000313|EMBL:EME60694.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber BKS 20-38.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_903_3
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(1259..2311)
DNA (1053bp) protein (351aa)
Uncharacterized protein Tax=Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040) RepID=D5UUV3_TSUPD
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_903_4
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(2295..2837)
DNA (543bp) protein (181aa)
RNA polymerase subunit sigma-24 Tax=Patulibacter americanus RepID=UPI0003B57419
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_903_5
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(2869..4425)
DNA (1557bp) protein (519aa)
ABC transporter related protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8W6_CONWI
ABC transporter
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_903_6
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4776..6638)
DNA (1863bp) protein (621aa)
hypothetical protein Tax=Actinoalloteichus spitiensis RepID=UPI00035EBDCE
Transketolase {ECO:0000313|EMBL:KII00308.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
transketolase
PLM3-1_50_b1_sep16_scaffold_903_7
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

6735..7835
DNA (1101bp) protein (367aa)
Transaldolase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZZ9_RUBXD
transaldolase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_903_8
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7984..8325
DNA (342bp) protein (114aa)
Transcriptional regulator, PadR-like family Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRP9_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH95432.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM3-1_50_b1_sep16_scaffold_903_9
unknown

Not on your lists

8279..8455
DNA (177bp) protein (59aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_903_10
Streptomyces sp. NRRL S-444, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8485..9228)
DNA (744bp) protein (248aa)
Myo-inositol-1(Or 4)-monophosphatase Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1FZT8_9PSEU
Histidinol phosphatase {ECO:0000313|EMBL:KJY45376.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-444.;"
histidinol phosphatase
PLM3-1_50_b1_sep16_scaffold_903_11
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(9398..10618)
DNA (1221bp) protein (407aa)
amidase (EC:3.5.1.4)
hypothetical protein Tax=Brevibacterium sp. JC43 RepID=UPI0002FA5BC5
Tax=RBG_16_Chloroflexi_52_11_curated
PLM3-1_50_b1_sep16_scaffold_903_12
unknown

Not on your lists

comp(10622..10741)
DNA (120bp) protein (40aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_903_13
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(10738..11982)
DNA (1245bp) protein (415aa)
protoheme IX farnesyltransferase (Heme O synthase) (HemeB farnesyltransferase) (EC:2.5.1.-)
Protoheme IX farnesyltransferase (Heme O synthase) (HemeB farnesyltransferase) bin=GWC2_Chloroflexi_73_18 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3-1_50_b1_sep16_scaffold_903_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(11951..13615)
DNA (1665bp) protein (555aa)
cytochrome C oxidase subunit I (EC:1.9.3.1)
Cytochrome c oxidase, subunit I {ECO:0000313|EMBL:ADB50335.1}; EC=1.9.3.1 {ECO:0000313|EMBL:ADB50335.1};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Cytochrome c oxidase, subunit I Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F355_CONWI
PLM3-1_50_b1_sep16_scaffold_903_15
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(13947..14702)
DNA (756bp) protein (252aa)
Cytochrome c oxidase subunit 2 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B5D1_HERA2
cytochrome c oxidase subunit II
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3-1_50_b1_sep16_scaffold_903_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

14803..15105
DNA (303bp) protein (101aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCP2_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB49515.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_903_17
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

15305..15973
DNA (669bp) protein (223aa)
ABC transporter ATP-binding protein Tax=Patulibacter americanus RepID=UPI0003B44A7C
drrA: daunorubicin resistance ABC transporter, ATP-binding protein
DrrA: daunorubicin resistance ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AHY47397.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM3-1_50_b1_sep16_scaffold_903_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

15970..16743
DNA (774bp) protein (258aa)
Putative multidrug ABC transporter permease protein Tax=Ilumatobacter coccineus YM16-304 RepID=M5A3S0_9ACTN
ABC-2 type transporter
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_903_19
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

16740..17510
DNA (771bp) protein (257aa)
hypothetical protein Tax=Patulibacter americanus RepID=UPI0003B5DB69
ABC-type multidrug transport system permease component
ABC-type multidrug transport system permease component {ECO:0000313|EMBL:AHY47395.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM3-1_50_b1_sep16_scaffold_903_20
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

17503..18285
DNA (783bp) protein (261aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SC9_SOLUE
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM3-1_50_b1_sep16_scaffold_903_21
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18282..19412
DNA (1131bp) protein (377aa)
fumarylacetoacetase (EC:3.7.1.2)
Fumarylacetoacetase {ECO:0000313|EMBL:ADG87831.1}; EC=3.7.1.2 {ECO:0000313|EMBL:ADG87831.1};; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI00036BF699
PLM3-1_50_b1_sep16_scaffold_903_22
Thermus filiformis, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(19671..19913)
DNA (243bp) protein (81aa)
4a-hydroxytetrahydrobiopterin dehydratase {ECO:0000256|SAAS:SAAS00118034}; EC=4.2.1.96 {ECO:0000256|SAAS:SAAS00118034};; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus filiformis.;"
pterin-4-alpha-carbinolamine dehydratase Tax=Thermus islandicus RepID=UPI0003B6A23B
pterin-4a-carbinolamine dehydratase
PLM3-1_50_b1_sep16_scaffold_903_23
Deinococcus geothermalis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

19943..20776
DNA (834bp) protein (278aa)
CDP-alcohol phosphatidyltransferase Tax=Deinococcus apachensis RepID=UPI00037DA453
CDP-alcohol phosphatidyltransferase
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:ABF46553.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus geothermalis (strain DSM 11300).;"
PLM3-1_50_b1_sep16_scaffold_903_24
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20930..21640)
DNA (711bp) protein (237aa)
Short-chain dehydrogenase/reductase SDR Tax=Streptomyces violaceusniger Tu 4113 RepID=G2PG41_STRVO
short-chain dehydrogenase/reductase SDR
Oxidoreductase {ECO:0000313|EMBL:ADI05153.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
PLM3-1_50_b1_sep16_scaffold_903_25
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

22127..23761
DNA (1635bp) protein (545aa)
RNA polymerase sigma factor Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FED5_CONWI
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_903_26
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24290..25138
DNA (849bp) protein (283aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00035D29A2
trypsin-like serine protease
Putative trypsin-like serine protease {ECO:0000313|EMBL:CCH90423.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM3-1_50_b1_sep16_scaffold_903_27
unknown

Not on your lists

comp(25345..25506)
DNA (162bp) protein (54aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_903_28
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25724..27241
DNA (1518bp) protein (506aa)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00036BD064
Uncharacterized protein {ECO:0000313|EMBL:KJK48947.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
peptidase s8 and s53 subtilisin kexin sedolisin
PLM3-1_50_b1_sep16_scaffold_903_29
unknown

Not on your lists

comp(27936..28268)
DNA (333bp) protein (111aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_903_30
unknown

Not on your lists

comp(29254..29394)
DNA (141bp) protein (47aa)

This feature has no annotations

Displaying items 1-30 of 56 in total

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