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PLM3-1_50_b1_sep16_scaffold_904

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_904_1
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(1..906)
DNA (906bp) protein (302aa)
Riboflavin biosynthesis protein RibBA Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1G0_CONWI
3,4-dihydroxy-2-butanone 4-phosphate synthase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_904_2
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(882..1487)
DNA (606bp) protein (202aa)
ribE; riboflavin synthase subuit alpha (EC:2.5.1.9)
Riboflavin synthase alpha chain Tax=Blastopirellula marina DSM 3645 RepID=A3ZQA7_9PLAN
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_904_3
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(1539..2498)
DNA (960bp) protein (320aa)
riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD Tax=Streptomyces sp. C RepID=D9VJX5_9ACTO
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_904_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(2674..3927)
DNA (1254bp) protein (418aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Sun protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1H6_CONWI
sun protein
PLM3-1_50_b1_sep16_scaffold_904_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3903..4709)
DNA (807bp) protein (269aa)
Methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase Tax=Patulibacter medicamentivorans RepID=H0E2C5_9ACTN
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_904_6
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(4706..5290)
DNA (585bp) protein (195aa)
peptide deformylase Tax=Patulibacter americanus RepID=UPI0003B3E36D
peptide deformylase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_904_7
unknown

Not on your lists

comp(5330..5938)
DNA (609bp) protein (203aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_904_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(5951..6295)
DNA (345bp) protein (115aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_904_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6400..8328)
DNA (1929bp) protein (643aa)
Primosomal protein N Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1I1_CONWI
primosomal protein N'
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_904_10
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(8363..9079)
DNA (717bp) protein (239aa)
iron permease FTR1; K07243 high-affinity iron transporter bin=bin9_gal15 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
Ferrous iron permease
Tax=CSP1_3_Armatimonadetes
PLM3-1_50_b1_sep16_scaffold_904_11
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

9186..9872
DNA (687bp) protein (229aa)
Iron (Metal) dependent repressor, DtxR family Tax=Alicyclobacillus hesperidum URH17-3-68 RepID=J9HPN9_9BACL
DtxR family iron (metal) dependent repressor
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_904_12
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(10191..11441)
DNA (1251bp) protein (417aa)
S-adenosylmethionine synthase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1I3_CONWI
metK: methionine adenosyltransferase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_904_13
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(11488..12444)
DNA (957bp) protein (319aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] Tax=Thiocapsa marina 5811 RepID=F9UCB8_9GAMM
glycerol-3-phosphate acyltransferase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_904_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(12441..13763)
DNA (1323bp) protein (441aa)
GTPase Der Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1I5_CONWI
ribosome-associated GTPase EngA
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_904_15
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(13825..14490)
DNA (666bp) protein (222aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RDD8_AMMDK
1-acyl-sn-glycerol-3-phosphate acyltransferase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_904_16
Slackia sp. CM382, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14487..15110)
DNA (624bp) protein (208aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia sp. CM382.;"
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase Tax=Slackia sp. CM382 RepID=J5VUU0_9ACTN
PLM3-1_50_b1_sep16_scaffold_904_17
Brevibacillus borstelensis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15107..16411)
DNA (1305bp) protein (435aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus borstelensis AK1.;"
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase Tax=Brevibacillus borstelensis AK1 RepID=M8DJ30_9BACL
PLM3-1_50_b1_sep16_scaffold_904_18
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

16516..17499
DNA (984bp) protein (328aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Tryptophan--tRNA ligase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1K3_CONWI
PLM3-1_50_b1_sep16_scaffold_904_19
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17508..18098)
DNA (591bp) protein (197aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;" source="Desulforudis audaxviator (strain MP104C).;"
Pseudouridine synthase Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I3X6_DESAP
pseudouridine synthase
PLM3-1_50_b1_sep16_scaffold_904_20
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

18243..19448
DNA (1206bp) protein (402aa)
Peptidase M29 aminopeptidase II Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FFD9_CONWI
peptidase M29 aminopeptidase II
Peptidase M29 aminopeptidase II {ECO:0000313|EMBL:ADB53732.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_904_21
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(19445..20047)
DNA (603bp) protein (201aa)
Chromosome segregation and condensation protein, ScpB Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1K0_CONWI
chromosome segregation and condensation protein ScpB
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_904_22
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(20026..20946)
DNA (921bp) protein (307aa)
Chromosome segregation and condensation protein ScpA Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1K1_CONWI
chromosome segregation and condensation protein ScpA
Chromosome segregation and condensation protein ScpA {ECO:0000313|EMBL:ADB52164.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_904_23
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(21142..21876)
DNA (735bp) protein (245aa)
Uncharacterized protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0L564_9ACTO
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
PLM3-1_50_b1_sep16_scaffold_904_24
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(21873..22340)
DNA (468bp) protein (156aa)
hypothetical protein Tax=Streptomyces sp. BoleA5 RepID=UPI0003714BA7
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_904_25
unknown

Not on your lists

comp(22482..22982)
DNA (501bp) protein (167aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_904_26
Propionibacterium acidipropionici, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23047..23913)
DNA (867bp) protein (289aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM; 6432 / NBRC 12425 / NCIMB 8070).;"
Prolipoprotein diacylglyceryl transferase Tax=Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) RepID=K7RT89_PROA4
prolipoprotein diacylglyceryl transferase
PLM3-1_50_b1_sep16_scaffold_904_27
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(23992..24195)
DNA (204bp) protein (68aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_904_28
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

24354..27545
DNA (3192bp) protein (1064aa)
adenylate/guanylate cyclase bin=bin8_Chloro species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
adenylate/guanylate cyclase
Tax=CSP1_4_Chloroflexi
PLM3-1_50_b1_sep16_scaffold_904_29
unknown

Not on your lists

comp(27549..28649)
DNA (1101bp) protein (367aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_904_30
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

28679..29098
DNA (420bp) protein (140aa)
pp2c12; phosphoprotein phosphatase (EC:3.1.3.16)
Transcriptional regulator, Crp/Fnr family bin=GWC2_Chloroflexi_73_18 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying items 1-30 of 35 in total

View Taxonomy