ggKbase home page

PLM3-1_50_b1_sep16_scaffold_371

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_371_1
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(3..224)
DNA (222bp) protein (74aa)
id=4424649 bin=GWC2_Chloroflexi_73_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_371_2
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(283..1611)
DNA (1329bp) protein (443aa)
glgC; glucose-1-phosphate adenylyltransferase (EC:2.7.7.27); K00975 glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] bin=bin8_Chloro species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
glgC; glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_371_3
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(1717..3966)
DNA (2250bp) protein (750aa)
peptidase M23 bin=bin8_Chloro species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
peptidase M23
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_371_4
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(3982..5499)
DNA (1518bp) protein (506aa)
leucyl aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1] bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
leucyl aminopeptidase (EC:3.4.11.1)
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_371_5
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(5665..6693)
DNA (1029bp) protein (343aa)
id=14628590 bin=bin8_Chloro tax=bin8_Chloro organism_group=Chloroflexi
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_371_6
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

6700..7788
DNA (1089bp) protein (363aa)
adenosine deaminase (EC:3.5.4.4)
Adenosine deaminase bin=GWC2_Chloroflexi_73_18 species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_371_7
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7798..8577)
DNA (780bp) protein (260aa)
Uncharacterized protein Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RLX9_BLASD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG05058.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM3-1_50_b1_sep16_scaffold_371_8
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(8603..9463)
DNA (861bp) protein (287aa)
HAD-superfamily hydrolase, subfamily IIA bin=GWC2_Chloroflexi_73_18 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
HAD-superfamily hydrolase
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_371_9
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

9471..10076
DNA (606bp) protein (202aa)
id=14628587 bin=bin8_Chloro tax=bin8_Chloro organism_group=Chloroflexi
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_371_10
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

10073..10555
DNA (483bp) protein (161aa)
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_371_11
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

10606..11547
DNA (942bp) protein (314aa)
cytochrome C biogenesis protein CcsB bin=bin8_Chloro species=Kineosphaera limosa genus=Kineosphaera taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
cytochrome C biogenesis protein CcsB
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_371_12
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

11552..12136
DNA (585bp) protein (195aa)
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_371_13
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

12144..13073
DNA (930bp) protein (310aa)
ABC-type transport system, ATPase component bin=GWC2_Chloroflexi_73_18 species=Deinococcus geothermalis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
ABC transporter
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_371_14
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

13070..13930
DNA (861bp) protein (287aa)
ABC-type transport system involved in multi-copper enzyme maturation, permease component bin=GWC2_Chloroflexi_73_18 species=Blastococcus saxobsidens genus=Blastococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_371_15
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(14145..14792)
DNA (648bp) protein (216aa)
id=14629623 bin=bin8_Chloro tax=bin8_Chloro organism_group=Chloroflexi
Tax=CSP1_4_Chloroflexi
PLM3-1_50_b1_sep16_scaffold_371_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(15024..16982)
DNA (1959bp) protein (653aa)
ftsH; cell division protein FtsH (EC:3.4.24.-)
Cell division protein FtsH Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L525_THERP
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
PLM3-1_50_b1_sep16_scaffold_371_17
unknown

Not on your lists

comp(16979..17626)
DNA (648bp) protein (216aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_371_18
unknown

Not on your lists

comp(17623..18063)
DNA (441bp) protein (147aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_371_19
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(18219..19256)
DNA (1038bp) protein (346aa)
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
id=14628600 bin=bin8_Chloro tax=bin8_Chloro organism_group=Chloroflexi
Tax=CSP1_4_Chloroflexi
PLM3-1_50_b1_sep16_scaffold_371_20
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(19446..21056)
DNA (1611bp) protein (537aa)
Glycoside hydrolase family 3 domain protein Tax=Chloroflexus RepID=A9WJ64_CHLAA
glycoside hydrolase family 3
Tax=BJP_IG2157_Anaerolineales_55_23
PLM3-1_50_b1_sep16_scaffold_371_21
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(21064..21840)
DNA (777bp) protein (259aa)
Binding-protein-dependent transport systems inner membrane component Tax=Chloroflexus RepID=A9WJ62_CHLAA
binding-protein-dependent transport system inner membrane protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_50_b1_sep16_scaffold_371_22
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(21950..22852)
DNA (903bp) protein (301aa)
Binding-protein-dependent transport systems inner membrane component Tax=Chloroflexus RepID=A9WJ61_CHLAA
binding-protein-dependent transport system inner membrane protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_50_b1_sep16_scaffold_371_23
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(22918..23277)
DNA (360bp) protein (120aa)
Extracellular solute-binding protein family 1 Tax=Chloroflexus RepID=A9WJ60_CHLAA
family 1 extracellular solute-binding protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_50_b1_sep16_scaffold_371_24
unknown

Not on your lists

comp(23530..24234)
DNA (705bp) protein (235aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_371_25
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(24391..25380)
DNA (990bp) protein (330aa)
ROK family protein Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B0V9_HERA2
ROK family protein
ROK family protein {ECO:0000313|EMBL:ABX03829.1}; species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
PLM3-1_50_b1_sep16_scaffold_371_26
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(25377..25847)
DNA (471bp) protein (157aa)
ROK family protein Tax=Roseiflexus sp. (strain RS-1) RepID=A5V137_ROSS1
ROK family protein
ROK family protein {ECO:0000313|EMBL:ABQ92590.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
Displaying 26 items

View Taxonomy