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PLM3-1_50_b1_sep16_scaffold_825

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_825_1
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(1..957)
DNA (957bp) protein (319aa)
Putative CoA-transferase bin=GWC2_Chloroflexi_73_18 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
L-carnitine dehydratase/bile acid-inducible protein F
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_825_2
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(985..1599)
DNA (615bp) protein (205aa)
id=14628430 bin=bin8_Chloro tax=bin8_Chloro organism_group=Chloroflexi
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_825_3
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

1834..2619
DNA (786bp) protein (262aa)
LmbE family protein bin=GWC2_Chloroflexi_73_18 species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_825_4
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(2648..4315)
DNA (1668bp) protein (556aa)
hypothetical protein; K07282 poly-gamma-glutamate synthesis protein (capsule biosynthesis protein) bin=bin8_Chloro species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
Bacterial capsule synthesis protein PGA_cap
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_825_trna_1
unknown

Not on your lists

comp(4384..4457)
DNA (74bp)
transferRNA Asp
PLM3-1_50_b1_sep16_scaffold_825_5
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

4432..5667
DNA (1236bp) protein (412aa)
Threonine aldolase bin=GWC2_Chloroflexi_73_18 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
threonine aldolase
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_825_6
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

5730..6578
DNA (849bp) protein (283aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_825_7
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

6675..7418
DNA (744bp) protein (248aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_825_8
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

7423..8124
DNA (702bp) protein (234aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase bin=GWC2_Chloroflexi_73_18 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_825_9
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

8121..8786
DNA (666bp) protein (222aa)
peptidyl-prolyl isomerase (EC:5.2.1.8)
Putative peptidyl-prolyl cis-trans isomerase bin=GWC2_Chloroflexi_73_18 species=Kineosphaera limosa genus=Kineosphaera taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_825_10
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

8810..9301
DNA (492bp) protein (164aa)
dolichyl-diphosphooligosaccharide--protein glycotransferase (EC:2.4.1.119) bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin8_Chloro organism_group=Chloroflexi
peptidyl-prolyl isomerase (EC:5.2.1.8)
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_825_11
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

10291..10698
DNA (408bp) protein (136aa)
Putative uncharacterized protein Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NMR4_ROSCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABU58835.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
PLM3-1_50_b1_sep16_scaffold_825_12
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(10746..11708)
DNA (963bp) protein (321aa)
Putative uncharacterized protein bin=GWB2_Chloroflexi_54_36 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
Tax=GWB2_Chloroflexi_54_36_curated
PLM3-1_50_b1_sep16_scaffold_825_13
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11809..12246
DNA (438bp) protein (146aa)
Uncharacterized protein Tax=Mycobacterium smegmatis JS623 RepID=L0J6F0_MYCSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB26453.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis JS623.;"
PLM3-1_50_b1_sep16_scaffold_825_14
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12268..14268)
DNA (2001bp) protein (667aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ASD1_RUBXD
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) {ECO:0000313|EMBL:ABG05697.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3-1_50_b1_sep16_scaffold_825_15
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14252..14785)
DNA (534bp) protein (178aa)
Uncharacterized protein Tax=Nitrococcus mobilis Nb-231 RepID=A4BV90_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR20357.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
heme NO binding domain-containing protein
PLM3-1_50_b1_sep16_scaffold_825_16
Amycolatopsis sp. MJM2582, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14948..15490)
DNA (543bp) protein (181aa)
hypothetical protein Tax=Amycolatopsis alba RepID=UPI00036F9278
GCN5-related N-acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:KFZ81894.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis sp. MJM2582.;"
PLM3-1_50_b1_sep16_scaffold_825_17
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(15529..16293)
DNA (765bp) protein (255aa)
Molybdate ABC transporter, inner membrane subunit Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C9J1_SPHTD
molybdate ABC transporter permease
Tax=RBG_16_RIF_CHLX_70_13_curated
Displaying 18 items

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