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PLM2_5_b1_sep16_scaffold_1063

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_1063_1
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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123..3821
DNA (3699bp) protein (1233aa)
Methionine synthase Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GLZ0_THISH
metH; B12-dependent methionine synthase
Methionine synthase {ECO:0000313|EMBL:ACL71743.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
PLM2_5_b1_sep16_scaffold_1063_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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3840..4457
DNA (618bp) protein (206aa)
Nitrogen fixation protein NifU Tax=uncultured Acidobacteria bacterium RepID=H5SPR6_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM2_5_b1_sep16_scaffold_1063_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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4468..5682
DNA (1215bp) protein (405aa)
Biotin carboxylase-like protein bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM2_5_b1_sep16_scaffold_1063_4
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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5679..6920
DNA (1242bp) protein (414aa)
hypothetical protein Tax=Gemmata obscuriglobus RepID=UPI00016C587F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV81595.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
PLM2_5_b1_sep16_scaffold_1063_5
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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comp(6865..7689)
DNA (825bp) protein (275aa)
methyltransferase type 11 bin=bin9_gal15 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
putative SAM-dependent methyltransferase
Tax=CSP1_3_Armatimonadetes
PLM2_5_b1_sep16_scaffold_1063_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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comp(7686..8360)
DNA (675bp) protein (225aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEK5_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM2_5_b1_sep16_scaffold_1063_7
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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8431..9030
DNA (600bp) protein (200aa)
RNA polymerase subunit sigma-24 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B4EE98
RNA polymerase sigma factor, sigma-70 family
Tax=RBG_16_Acidobacteria_70_10_curated
PLM2_5_b1_sep16_scaffold_1063_8
unknown

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9027..9629
DNA (603bp) protein (201aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_1063_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(9614..10120)
DNA (507bp) protein (169aa)
Transcription elongation factor GreA Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABM5_GEMAT
transcription elongation factor GreA/GreB domain-containing protein
Transcription elongation factor GreA/GreB domain-containing protein {ECO:0000313|EMBL:AHG87594.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_1063_10
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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10209..10988
DNA (780bp) protein (260aa)
chromosome partitioning ATPase; K03593 ATP-binding protein involved in chromosome partitioning bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
mrp; putative ATPase
Tax=CSP1_6_Rokubacteria
PLM2_5_b1_sep16_scaffold_1063_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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10985..11446
DNA (462bp) protein (154aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM2_5_b1_sep16_scaffold_1063_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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11443..11685
DNA (243bp) protein (81aa)
hypothetical protein
fer; putative ferredoxin; K05337 ferredoxin bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_1063_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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11753..13726
DNA (1974bp) protein (658aa)
Putative Universal stress protein UspA (Modular protein) bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Universal stress protein family
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_1063_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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13723..14991
DNA (1269bp) protein (423aa)
radical SAM protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin3_NC10 organism_group=NC10
radical SAM protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_1063_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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14991..16697
DNA (1707bp) protein (569aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_1063_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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16684..17415
DNA (732bp) protein (244aa)
Putative heme protein bin=GWA2_Methylomirabilis_73_35 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
heme-binding protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Displaying 16 items

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