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PLM2_5_b1_sep16_scaffold_2

Search features with annotation key words

Displaying items 1-30 of 615 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_2_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2..1324
DNA (1323bp) protein (441aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_2_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1311..2126
DNA (816bp) protein (272aa)
Heme-binding protein Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QX92_ISOPI
heme-binding protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_2_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2123..2908
DNA (786bp) protein (262aa)
Putative (Diheme) protein bin=GWA2_Methylomirabilis_73_35 species=endosymbiont of Tevnia jerichonana genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM2_5_b1_sep16_scaffold_2_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2901..4460
DNA (1560bp) protein (520aa)
putative cytochrome c bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin7_NC10_sister organism_group=NC10
putative cytochrome c
Tax=GWA2_Rokubacteria_73_35_curated
PLM2_5_b1_sep16_scaffold_2_5
GWA2_OP3_52_8_curated, Omnitrophica, Bacteria

Not on your lists

4479..5219
DNA (741bp) protein (247aa)
hypothetical protein Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B5F0A6
hypothetical protein
Tax=GWA2_OP3_52_8_curated
PLM2_5_b1_sep16_scaffold_2_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

5239..5910
DNA (672bp) protein (224aa)
Putative cytochrome c oxidase, subunit II bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
heme/copper-type cytochrome/quinol oxidases subunit 2
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM2_5_b1_sep16_scaffold_2_7
R_NC10_66_22, NC10, Bacteria

Not on your lists

5907..7664
DNA (1758bp) protein (586aa)
cytochrome c oxidase subunit I (EC:1.9.3.1)
Cytochrome c oxidase subunit I bin=GWD2_Deltaproteobacteria_55_8 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM2_5_b1_sep16_scaffold_2_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

7661..8383
DNA (723bp) protein (241aa)
cytochrome oxidase subunit III Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B3081F
cytochrome c oxidase subunit III
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM2_5_b1_sep16_scaffold_2_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

8392..8667
DNA (276bp) protein (92aa)
Caa(3)-type oxidase, subunit IV bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
caa(3)-type oxidase, subunit IV
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM2_5_b1_sep16_scaffold_2_10
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

8856..9512
DNA (657bp) protein (219aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Protoheme IX farnesyltransferase Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DQ28_SINAD
protoheme IX farnesyltransferase
PLM2_5_b1_sep16_scaffold_2_11
unknown

Not on your lists

9519..9686
DNA (168bp) protein (56aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_2_12
unknown

Not on your lists

9683..9853
DNA (171bp) protein (57aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_2_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

9864..10940
DNA (1077bp) protein (359aa)
cld2; chlorite dismutase (EC:1.13.11.49)
chlorite dismutase Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AC35
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_2_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10984..11940
DNA (957bp) protein (319aa)
uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C799_SPHTD
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_2_15
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

11930..12841
DNA (912bp) protein (304aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
ferrochelatase (EC:4.99.1.1)
Ferrochelatase Tax=Nitrolancetus hollandicus Lb RepID=I4EFF6_9CHLR
PLM2_5_b1_sep16_scaffold_2_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

12838..13878
DNA (1041bp) protein (347aa)
HemY2 protein Tax=Sorangium cellulosum (strain So ce56) RepID=A9G3I1_SORC5
hemY2; hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_2_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(13816..14904)
DNA (1089bp) protein (363aa)
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase {ECO:0000313|EMBL:CDM64422.1}; EC=1.14.14.5 {ECO:0000313|EMBL:CDM64422.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Gll4257 protein Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NDH8_GLOVI
monooxygenase
PLM2_5_b1_sep16_scaffold_2_18
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(14904..15863)
DNA (960bp) protein (320aa)
Putative uncharacterized protein Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F901_ACIC5
Glutathione synthase/ribosomal protein S6 modification enzyme (Glutaminyl transferase) {ECO:0000313|EMBL:CDM64421.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_2_19
Burkholderiaceae bacterium 26, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15868..16413)
DNA (546bp) protein (182aa)
FMN reductase Tax=Ralstonia solanacearum RepID=UPI000308152F
FMN reductase {ECO:0000313|EMBL:KJJ99530.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 26.;"
FMN reductase
PLM2_5_b1_sep16_scaffold_2_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16602..18605)
DNA (2004bp) protein (668aa)
Transketolase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKA2_9BACT
transketolase
Transketolase {ECO:0000313|EMBL:AHG89069.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_2_21
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

18798..19817
DNA (1020bp) protein (340aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4Q2_GEMAT
WD40-like beta Propeller containing protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM2_5_b1_sep16_scaffold_2_22
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

19814..20533
DNA (720bp) protein (240aa)
Signal peptidase I Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC84_GEMAT
signal peptidase I
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM2_5_b1_sep16_scaffold_2_23
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

20553..20966
DNA (414bp) protein (138aa)
cytochrome c class I bin=bin1_lowGC species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin1_lowGC organism_group=Unknown_CP
electron transporter, SCO1/SenC family protein/cytochrome c
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM2_5_b1_sep16_scaffold_2_24
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20954..23005
DNA (2052bp) protein (684aa)
hypothetical protein Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036F4AA4
Uncharacterized protein {ECO:0000313|EMBL:ETX00812.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
TonB-dependent receptor
PLM2_5_b1_sep16_scaffold_2_25
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(23016..23210)
DNA (195bp) protein (65aa)
Translation initiation factor IF-1 Tax=Roseiflexus RepID=IF1_ROSCS
infA; translation initiation factor IF-1
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_2_26
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

23624..23938
DNA (315bp) protein (105aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_2_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(23935..25635)
DNA (1701bp) protein (567aa)
Methyl-accepting chemotaxis protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5N4_GEMAT
methyl-accepting chemotaxis protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_2_28
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(25632..26633)
DNA (1002bp) protein (334aa)
Putative branched-chain amino acid-binding protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5N5_GEMAT
putative branched-chain amino acid-binding protein
Putative branched-chain amino acid-binding protein {ECO:0000313|EMBL:BAH37545.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM2_5_b1_sep16_scaffold_2_29
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

26846..27688
DNA (843bp) protein (281aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_2_30
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(27685..28506)
DNA (822bp) protein (274aa)
Putative Peptidase Tax=Nitrospina gracilis 3/211 RepID=M1YVH5_9BACT
alpha/beta fold family hydrolase
Tax=GWC2_Gemmatimonadetes_71_10_curated
Displaying items 1-30 of 615 in total

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