ggKbase home page

PLM2_5_b1_sep16_scaffold_85

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_85_1

Not on your lists

3..806
DNA (804bp) protein (268aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL69050.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM2_5_b1_sep16_scaffold_85_2
unknown

Not on your lists

817..1248
DNA (432bp) protein (144aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_85_3

Not on your lists

1249..1671
DNA (423bp) protein (141aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL69049.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM2_5_b1_sep16_scaffold_85_4
unknown

Not on your lists

1671..2162
DNA (492bp) protein (164aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_85_5

Not on your lists

2166..2651
DNA (486bp) protein (162aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM73816.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM2_5_b1_sep16_scaffold_85_6

Not on your lists

2651..3130
DNA (480bp) protein (160aa)
hypothetical protein Tax=Paracoccus zeaxanthinifaciens RepID=UPI0003B3F5D1
Uncharacterized protein {ECO:0000313|EMBL:KKM73815.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM2_5_b1_sep16_scaffold_85_7
unknown

Not on your lists

3127..3831
DNA (705bp) protein (235aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_85_8

Not on your lists

3828..10673
DNA (6846bp) protein (2282aa)
DNA repair protein Tax=delta proteobacterium NaphS2 RepID=D8FBV2_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KKL81320.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_85_9
unknown

Not on your lists

10670..11101
DNA (432bp) protein (144aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_85_10
unknown

Not on your lists

11127..11354
DNA (228bp) protein (76aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_85_11
Cardiobacterium hominis, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11351..11815
DNA (465bp) protein (155aa)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium.;" source="Cardiobacterium hominis ATCC 15826.;"
Lysozyme Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N775_9GAMM
phage related lysozyme
PLM2_5_b1_sep16_scaffold_85_12
unknown

Not on your lists

11800..12009
DNA (210bp) protein (70aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_85_13
unknown

Not on your lists

12021..12641
DNA (621bp) protein (207aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_85_14
unknown

Not on your lists

12638..12913
DNA (276bp) protein (92aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_85_15
unknown

Not on your lists

12910..13488
DNA (579bp) protein (193aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_85_16
unknown

Not on your lists

13715..14008
DNA (294bp) protein (98aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_85_17
unknown

Not on your lists

comp(13896..14390)
DNA (495bp) protein (165aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_85_18
unknown

Not on your lists

14496..14702
DNA (207bp) protein (69aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_85_19
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

14699..15037
DNA (339bp) protein (113aa)
HNH nuclease Tax=Synechococcus sp. (strain CC9902) RepID=Q3AX52_SYNS9
HNH nuclease
Tax=RBG_16_Actinobacteria_68_21_curated
PLM2_5_b1_sep16_scaffold_85_20
Oxalobacter formigenes, Oxalobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15113..15862
DNA (750bp) protein (250aa)
Uncharacterized protein Tax=Oxalobacter formigenes HOxBLS RepID=C3X1R4_OXAFO
Uncharacterized protein {ECO:0000313|EMBL:EEO27150.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Oxalobacter.;" source="Oxalobacter formigenes HOxBLS.;"
AAA ATPase
PLM2_5_b1_sep16_scaffold_85_21
Synechococcus phage S-CBS4, Caudovirales, Viruses

Not on your lists

15859..16329
DNA (471bp) protein (157aa)
Uncharacterized protein Tax=Synechococcus phage S-CBS4 RepID=R9TFG4_9CAUD
Endonuclease {ECO:0000313|EMBL:AEX55970.1}; species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Synechococcus phage S-CBS4.;"
PLM2_5_b1_sep16_scaffold_85_22

Not on your lists

16326..17006
DNA (681bp) protein (227aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-M04 RepID=UPI00037AA7ED
Marine sediment metagenome DNA, contig: S06H3_S01044 {ECO:0000313|EMBL:GAI31664.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM2_5_b1_sep16_scaffold_85_23
unknown

Not on your lists

17003..17251
DNA (249bp) protein (83aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_85_24
unknown

Not on your lists

17627..17842
DNA (216bp) protein (72aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_85_25
unknown

Not on your lists

17839..18042
DNA (204bp) protein (68aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_85_26
unknown

Not on your lists

18042..18245
DNA (204bp) protein (68aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_85_27
unknown

Not on your lists

18245..18556
DNA (312bp) protein (104aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_85_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18553..19848
DNA (1296bp) protein (432aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92154.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_85_29
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

Not on your lists

19845..21419
DNA (1575bp) protein (525aa)
Tax=RBG_13_Bathyarchaeota_52_12_curated
PLM2_5_b1_sep16_scaffold_85_30
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21420..22454
DNA (1035bp) protein (345aa)
hypothetical protein Tax=Paenibacillus daejeonensis RepID=UPI00037AC738
Phage Gp37Gp68 {ECO:0000313|EMBL:EPY00916.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum fulvum MGU-K5.;"
Gp37Gp68 family protein
Displaying items 1-30 of 71 in total

View Taxonomy