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PLM2_5_b1_sep16_scaffold_4533

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_4533_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(1699..2580)
DNA (882bp) protein (294aa)
integron integrase bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
integron integrase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM2_5_b1_sep16_scaffold_4533_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(2804..3721)
DNA (918bp) protein (306aa)
Tyrosine recombinase XerC Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8W1_GEMAT
Tyrosine recombinase xerC
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM2_5_b1_sep16_scaffold_4533_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(3694..4296)
DNA (603bp) protein (201aa)
Uncharacterized protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0L879_9ACTO
SNARE associated protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_4533_4

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comp(4289..4777)
DNA (489bp) protein (163aa)
2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHN2_RHOM4
Marine sediment metagenome DNA, contig: S03H2_L01930 {ECO:0000313|EMBL:GAH39815.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM2_5_b1_sep16_scaffold_4533_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(4778..5179)
DNA (402bp) protein (134aa)
N5-carboxyaminoimidazole ribonucleotide mutase Tax=Patulibacter medicamentivorans RepID=H0E2L2_9ACTN
phosphoribosylaminoimidazole carboxylase catalytic subunit
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_4533_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(5180..6223)
DNA (1044bp) protein (348aa)
Cyclic dehypoxanthine futalosine synthase {ECO:0000256|HAMAP-Rule:MF_00992}; Short=Cyclic DHFL synthase {ECO:0000256|HAMAP-Rule:MF_00992};; EC=1.21.98.1 {ECO:0000256|HAMAP-Rule:MF_00992};; Dehypoxanthine futalosine cyclase {ECO:0000256|HAMAP-Rule:MF_00992}; Menaquinone biosynthetic enzyme MqnC {ECO:0000256|HAMAP-Rule:MF_00992}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8W4_GEMAT
menaquinone biosynthesis protein
PLM2_5_b1_sep16_scaffold_4533_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6226..7053)
DNA (828bp) protein (276aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8W5_GEMAT
protein of unknown function DUF178
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_4533_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7050..8276)
DNA (1227bp) protein (409aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8W6_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_4533_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(8273..9514)
DNA (1242bp) protein (414aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DT05_DESRL
3-oxoacyl-[acyl-carrier-protein] synthase 2
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM2_5_b1_sep16_scaffold_4533_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9514..9771)
DNA (258bp) protein (86aa)
Acyl carrier protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=ACP_GEMAT
Acyl carrier protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_4533_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9805..9903)
DNA (99bp) protein (33aa)
3-oxoacyl-[acyl-carrier-protein] reductase Tax=uncultured bacterium RepID=K1XQF1_9BACT
3-oxoacyl-(acyl-carrier-protein) reductase
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AHG90807.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 11 items

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