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PLM2_5_b1_sep16_scaffold_1194

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_1194_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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3..1376
DNA (1374bp) protein (458aa)
Amino acid transporter Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D9U4_SINAD
Amino acid/polyamine/organocation transporter, APC superfamily (TC 2.A.3) {ECO:0000313|EMBL:CDM66820.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
amino acid transporter
PLM2_5_b1_sep16_scaffold_1194_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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1458..2663
DNA (1206bp) protein (402aa)
von Willebrand factor type A domain protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHY1_CHLTF
Mg-chelatase subunit ChlD {ECO:0000313|EMBL:CDM65577.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
von Willebrand factor type A domain-containing protein
PLM2_5_b1_sep16_scaffold_1194_3
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2676..2918)
DNA (243bp) protein (81aa)
hypothetical protein Tax=Methylobacter marinus RepID=UPI00037DA2E0
hypothetical protein
Tax=BJP_IG2069_Desfulfarculales_53_13
PLM2_5_b1_sep16_scaffold_1194_4
unknown

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3197..4063
DNA (867bp) protein (289aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_1194_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(4138..6057)
DNA (1920bp) protein (640aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3)
hypothetical protein Tax=Chlorogloeopsis RepID=UPI0002F24302
PAS domain S-box {ECO:0000313|EMBL:CDM66007.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PLM2_5_b1_sep16_scaffold_1194_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(6063..7463)
DNA (1401bp) protein (467aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:CDM66008.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Fis family transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family bin=GWC2_CP_Nitrospirae-rel_42_7 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
PLM2_5_b1_sep16_scaffold_1194_7
unknown

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comp(8013..8687)
DNA (675bp) protein (225aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_1194_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(8754..9452)
DNA (699bp) protein (233aa)
Tetratricopeptide repeat protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHE2_CHLTF
Tetratricopeptide repeat {ECO:0000313|EMBL:CDM65561.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_1194_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(9662..10414)
DNA (753bp) protein (251aa)
Repeat-containing protein Tax=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) RepID=Q39TL7_GEOMG
repeat-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM2_5_b1_sep16_scaffold_1194_10
GWA1_OP11_45_10_partial, Microgenomates, Bacteria

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10551..11129
DNA (579bp) protein (193aa)
ISE/inbred ISE genomic scaffold, scaffold_pathogens_Hcontortus_scaffold_2142 Tax=Haemonchus contortus RepID=U6P4A2_HAECO
Uncharacterized protein {ECO:0000313|EMBL:KKT87476.1}; species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA1_45_10.;"
putative membrane protein
PLM2_5_b1_sep16_scaffold_1194_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(11676..12170)
DNA (495bp) protein (165aa)
ResB protein required for cytochrome c biosynthesis Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIJ4_CHLTF
ResB protein required for cytochrome c biosynthesis {ECO:0000313|EMBL:CDM65563.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ResB protein required for cytochrome c biosynthesis
PLM2_5_b1_sep16_scaffold_1194_12
unknown

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12447..13637
DNA (1191bp) protein (397aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_1194_13
unknown

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13634..14491
DNA (858bp) protein (286aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_1194_14
unknown

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14674..15036
DNA (363bp) protein (121aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_1194_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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15149..16684
DNA (1536bp) protein (512aa)
Cytochrome c family protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IN37_KORVE
cytochrome c family protein
Cytochrome c family protein {ECO:0000313|EMBL:ABF41713.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
Displaying 15 items

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