ggKbase home page

PLM2_30_b1_sep16_scaffold_1095

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_b1_sep16_scaffold_1095_1
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(30..1661)
DNA (1632bp) protein (544aa)
Outer membrane efflux protein Tax=Chthoniobacter flavus Ellin428 RepID=B4DAJ8_9BACT
transporter
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
PLM2_30_b1_sep16_scaffold_1095_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(1758..2036)
DNA (279bp) protein (93aa)
Transcriptional regulator, MarR family Tax=Chthoniobacter flavus Ellin428 RepID=B4DAJ6_9BACT
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EDY16514.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
MarR family transcriptional regulator
PLM2_30_b1_sep16_scaffold_1095_3
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2294..3592)
DNA (1299bp) protein (433aa)
molybdenum cofactor synthesis domain Tax=Verrucomicrobium spinosum RepID=UPI00017455D8
molybdopterin biosynthesis protein MoeA
Tax=CG_Syntroph_01
PLM2_30_b1_sep16_scaffold_1095_trna_1
unknown

Not on your lists

3671..3758
DNA (88bp)
transferRNA Ser
PLM2_30_b1_sep16_scaffold_1095_4
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3825..5630
DNA (1806bp) protein (602aa)
Integrase family protein Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IMR7_METNO
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ACL60260.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
PLM2_30_b1_sep16_scaffold_1095_5
unknown

Not on your lists

comp(6095..6409)
DNA (315bp) protein (105aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_1095_6
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6530..6709)
DNA (180bp) protein (60aa)
CsbD family protein bin=GWC2_Pelobacter_58_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
CsbD family protein
Tax=BJP_IG2069_Syntrophobacterales_47_18
PLM2_30_b1_sep16_scaffold_1095_7
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

7150..8646
DNA (1497bp) protein (499aa)
NAD dependent epimerase/dehydratase family Tax=Nitrolancetus hollandicus Lb RepID=I4EJD4_9CHLR
NAD dependent epimerase/dehydratase family {ECO:0000313|EMBL:CCF84796.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
NmrA family protein
PLM2_30_b1_sep16_scaffold_1095_8
Aphanomyces astaci, Aphanomyces, Saprolegniales, Eukaryota

Not on your lists

comp(8787..9383)
DNA (597bp) protein (199aa)
Uncharacterized protein Tax=Saprolegnia diclina VS20 RepID=T0PJD5_9STRA
Uncharacterized protein {ECO:0000313|EMBL:ETV75151.1}; species="Eukaryota; Stramenopiles; Oomycetes; Saprolegniales; Saprolegniaceae; Aphanomyces.;" source="Aphanomyces astaci.;"
PLM2_30_b1_sep16_scaffold_1095_9
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9522..10277)
DNA (756bp) protein (252aa)
CsbD family protein Tax=Desulfococcus multivorans DSM 2059 RepID=S7V8D2_DESML
CsbD family protein {ECO:0000313|EMBL:EPR40798.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus multivorans DSM 2059.;"
CsbD family protein
PLM2_30_b1_sep16_scaffold_1095_10
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10952..11881)
DNA (930bp) protein (310aa)
hypothetical protein Tax=Herbaspirillum sp. JC206 RepID=UPI00030B1457
putative phytochrome sensor protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
Displaying 11 items

View Taxonomy