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PLM2_30_b1_sep16_scaffold_894

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_b1_sep16_scaffold_894_1
R_OD1_Uhrbacteria_46_25, Uhrbacteria, Parcubacteria, Bacteria

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comp(1..279)
DNA (279bp) protein (93aa)
HAD family hydrolase bin=bin1_lowGC species=Petrotoga mobilis genus=Petrotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=bin1_lowGC organism_group=Unknown_CP
HAD family hydrolase
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_46_25_curated
PLM2_30_b1_sep16_scaffold_894_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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473..2014
DNA (1542bp) protein (514aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase Tax=Chthoniobacter flavus Ellin428 RepID=B4D3W7_9BACT
PLM2_30_b1_sep16_scaffold_894_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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2018..3076
DNA (1059bp) protein (353aa)
Glucose-6-P dehydrogenase subunit-like protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D3W6_9BACT
Glucose-6-P dehydrogenase subunit-like protein {ECO:0000313|EMBL:EDY18946.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
glucose-6-P dehydrogenase subunit
PLM2_30_b1_sep16_scaffold_894_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(3192..4388)
DNA (1197bp) protein (399aa)
Glycosyl transferase group 1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6F7_9BACT
Glycosyl transferase group 1 {ECO:0000313|EMBL:EDY18066.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
glycosyltransferase
PLM2_30_b1_sep16_scaffold_894_5
Piscirickettsia salmonis, Piscirickettsia, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4421..4807)
DNA (387bp) protein (129aa)
Uncharacterized protein Tax=Piscirickettsia salmonis LF-89 = ATCC VR-1361 RepID=U4TED0_PISSA
Uncharacterized protein {ECO:0000313|EMBL:ERL62534.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Piscirickettsia.;" source="Piscirickettsia salmonis LF-89 = ATCC VR-1361.;"
yciA; putative hydrolase
PLM2_30_b1_sep16_scaffold_894_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(4953..5963)
DNA (1011bp) protein (337aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase Tax=Chthoniobacter flavus Ellin428 RepID=B4DBL0_9BACT
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
PLM2_30_b1_sep16_scaffold_894_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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6020..6814
DNA (795bp) protein (265aa)
Phage SPO1 DNA polymerase-related protein Tax=Chthoniobacter flavus Ellin428 RepID=B4CUQ5_9BACT
Phage SPO1 DNA polymerase-related protein {ECO:0000313|EMBL:EDY22293.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Uracil-DNA glycosylase
PLM2_30_b1_sep16_scaffold_894_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(6916..7944)
DNA (1029bp) protein (343aa)
hypothetical protein Tax=Limnohabitans sp. Rim47 RepID=UPI00035D20EC
Squalene/phytoene synthase {ECO:0000313|EMBL:EDY22294.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Squalene/phytoene synthase
PLM2_30_b1_sep16_scaffold_894_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(7941..8990)
DNA (1050bp) protein (350aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4CW05_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY21597.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_894_10
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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9078..10277
DNA (1200bp) protein (400aa)
hypothetical protein Tax=Rubritalea marina RepID=UPI000362AF1B
hemN; Coproporphyrinogen III oxidase or related Fe-S oxidoreductase
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
PLM2_30_b1_sep16_scaffold_894_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(10343..10645)
DNA (303bp) protein (101aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D9U0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY16871.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM2_30_b1_sep16_scaffold_894_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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10717..11790
DNA (1074bp) protein (358aa)
Mannose-1-phosphate guanylyltransferase (GDP) {ECO:0000313|EMBL:EDY16872.1}; EC=2.7.7.22 {ECO:0000313|EMBL:EDY16872.1};; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22)
Mannose-1-phosphate guanylyltransferase (GDP) Tax=Chthoniobacter flavus Ellin428 RepID=B4D9U1_9BACT
PLM2_30_b1_sep16_scaffold_894_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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11802..12236
DNA (435bp) protein (145aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Putative Holliday junction resolvase Tax=Chthoniobacter flavus Ellin428 RepID=B4D9U2_9BACT
Holliday junction resolvase YqgF
PLM2_30_b1_sep16_scaffold_894_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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12314..12853
DNA (540bp) protein (180aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A Tax=Chthoniobacter flavus Ellin428 RepID=B4D9U5_9BACT
Displaying 14 items

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