ggKbase home page

PLM2_30_b1_sep16_scaffold_2988

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_b1_sep16_scaffold_2988_1
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3..395
DNA (393bp) protein (131aa)
Transglutaminase domain-containing protein Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TRB8_MARTH
transglutaminase domain-containing protein
Transglutaminase domain-containing protein {ECO:0000313|EMBL:ADR20652.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB; 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter; tractuosus).;"
PLM2_30_b1_sep16_scaffold_2988_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


550..2172
DNA (1623bp) protein (541aa)
Methionyl-tRNA synthetase Tax=Chthoniobacter flavus Ellin428 RepID=B4CVA7_9BACT
Methionyl-tRNA synthetase {ECO:0000313|EMBL:EDY21920.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
methionyl-tRNA synthetase
PLM2_30_b1_sep16_scaffold_2988_3
unknown

Not on your lists

2292..2597
DNA (306bp) protein (102aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_2988_4
GWF2_Verrucomicrobia_51_19_curated, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

2578..2862
DNA (285bp) protein (95aa)
Putative uncharacterized protein bin=GWF2_Verrucomicrobia_51_19 species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Verrucomicrobia_51_19 organism_group=Verrucomicrobia organism_desc=Good +
hypothetical protein
Tax=GWF2_Verrucomicrobia_51_19_curated
PLM2_30_b1_sep16_scaffold_2988_5
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(3120..4484)
DNA (1365bp) protein (455aa)
FolC bifunctional protein Tax=Chthoniobacter flavus Ellin428 RepID=B4CZE0_9BACT
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
Tax=CG_Nitrosp_01
PLM2_30_b1_sep16_scaffold_2988_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(4481..5326)
DNA (846bp) protein (282aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta Tax=Chthoniobacter flavus Ellin428 RepID=B4CZE1_9BACT
acetyl-CoA carboxylase, carboxyl transferase subunit beta
PLM2_30_b1_sep16_scaffold_2988_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(5332..6060)
DNA (729bp) protein (243aa)
Competence protein F, putative Tax=Chthoniobacter flavus Ellin428 RepID=B4CZE2_9BACT
Competence protein F, putative {ECO:0000313|EMBL:EDY20106.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
amidophosphoribosyltransferase
PLM2_30_b1_sep16_scaffold_2988_8
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6038..6919)
DNA (882bp) protein (294aa)
Abortive infection protein Tax=Pedosphaera parvula Ellin514 RepID=B9XP57_9BACT
abortive infection protein
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
PLM2_30_b1_sep16_scaffold_2988_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

6946..7251
DNA (306bp) protein (102aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4CZE8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20112.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM2_30_b1_sep16_scaffold_2988_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

7261..7713
DNA (453bp) protein (151aa)
bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase (EC:2.6.1.62)
Aminotransferase class-III Tax=Chthoniobacter flavus Ellin428 RepID=B4CZE9_9BACT
Aminotransferase class-III {ECO:0000313|EMBL:EDY20113.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Displaying 10 items

View Taxonomy