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PLM2_30_b1_sep16_scaffold_3094

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_b1_sep16_scaffold_3094_1
unknown

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1..339
DNA (339bp) protein (113aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_3094_2
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(357..584)
DNA (228bp) protein (76aa)
50S ribosomal protein L28 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1U7_9BACT
rpmB; 50S ribosomal protein L28
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
PLM2_30_b1_sep16_scaffold_3094_3
RLO_PLX_64_10, Bacteria

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809..1846
DNA (1038bp) protein (346aa)
oxidoreductase domain protein Tax=Verrucomicrobium spinosum RepID=UPI0001744D7C
oxidoreductase domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM2_30_b1_sep16_scaffold_3094_4
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1888..2487)
DNA (600bp) protein (200aa)
UPI0003CF6C70 related cluster Tax=unknown RepID=UPI0003CF6C70
Membrane protein {ECO:0000313|EMBL:EZQ17785.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_3094_5
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(2557..3123)
DNA (567bp) protein (189aa)
Uncharacterized protein Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R0I0_PIRSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB14848.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
PLM2_30_b1_sep16_scaffold_3094_6
unknown

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comp(3087..3290)
DNA (204bp) protein (68aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_3094_7
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3560..4009)
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IG48_BEII9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB97122.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
PLM2_30_b1_sep16_scaffold_3094_8
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4166..7111)
DNA (2946bp) protein (982aa)
membrane protein Tax=Verrucomicrobium spinosum RepID=UPI00017445F7
membrane protein
Tax=BJP_IG2069_Desfulfarculales_53_13
PLM2_30_b1_sep16_scaffold_3094_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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7219..7671
DNA (453bp) protein (151aa)
Transcriptional regulator, LysR family Tax=Pedosphaera parvula Ellin514 RepID=B9XBV2_9BACT
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EEF62420.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
LysR family transcriptional regulator
PLM2_30_b1_sep16_scaffold_3094_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

7652..8062
DNA (411bp) protein (137aa)
Transcriptional regulator, LysR family Tax=Pedosphaera parvula Ellin514 RepID=B9XBV2_9BACT
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EEF62420.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
LysR family transcriptional regulator
PLM2_30_b1_sep16_scaffold_3094_11
R_OD1_Giovannonibacteria_46_13, Giovannonibacteria, Parcubacteria, Bacteria

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comp(8094..8285)
DNA (192bp) protein (64aa)
hypothetical protein Tax=Streptomyces sp. CNB091 RepID=UPI00036D1C91
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_46_13_curated
PLM2_30_b1_sep16_scaffold_3094_12
GWA2_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8303..8830)
DNA (528bp) protein (176aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMT4_KORVE
alkyl hydroperoxide reductase
Tax=GWA2_Deltaproteobacteria_47_9_curated
PLM2_30_b1_sep16_scaffold_3094_13
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8982..9965
DNA (984bp) protein (328aa)
membrane protein Tax=Methylococcus capsulatus RepID=UPI0002EB4F17
hflK protein
Putative hflK protein {ECO:0000313|EMBL:AAU90434.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
PLM2_30_b1_sep16_scaffold_3094_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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9962..10675
DNA (714bp) protein (238aa)
Protein HflC Tax=Chthoniobacter flavus Ellin428 RepID=B4D927_9BACT
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
HflC protein
Displaying 14 items

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