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PLM2_30_b1_sep16_scaffold_1093

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_b1_sep16_scaffold_1093_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(3..1253)
DNA (1251bp) protein (417aa)
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:CDM65688.1}; EC=1.2.1.16 {ECO:0000313|EMBL:CDM65688.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
succinate-semialdehyde dehydrogenase (NAD(P)+) (EC:1.2.1.16)
Aldehyde dehydrogenase Tax=Oscillatoria sp. PCC 6506 RepID=D8G695_9CYAN
PLM2_30_b1_sep16_scaffold_1093_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(1347..2921)
DNA (1575bp) protein (525aa)
Substrate-binding region of ABC-type glycine betaine transport system Tax=Pedosphaera parvula Ellin514 RepID=B9XK64_9BACT
Substrate-binding region of ABC-type glycine betaine transport system {ECO:0000313|EMBL:EEF59702.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Substrate-binding region of ABC-type glycine betaine transport system
PLM2_30_b1_sep16_scaffold_1093_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(2918..3661)
DNA (744bp) protein (248aa)
ABC transporter related-protein Tax=Pedosphaera parvula Ellin514 RepID=B9XK63_9BACT
ABC transporter related-protein {ECO:0000313|EMBL:EEF59701.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ABC transporter-like protein
PLM2_30_b1_sep16_scaffold_1093_4
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

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comp(3695..4681)
DNA (987bp) protein (329aa)
Uncharacterized protein Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AZ98_HERA2
hypothetical protein
Tax=RBG_16_Chloroflexi_60_22_curated
PLM2_30_b1_sep16_scaffold_1093_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(4732..6087)
DNA (1356bp) protein (452aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XK60_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF59698.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_1093_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(6084..6485)
DNA (402bp) protein (134aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D8X9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY17024.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_1093_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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6592..7470
DNA (879bp) protein (293aa)
Alpha/beta hydrolase fold protein Tax=Chthoniobacter flavus Ellin428 RepID=B4DCA3_9BACT
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EDY15933.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
peptidase
PLM2_30_b1_sep16_scaffold_1093_8
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7467..8678)
DNA (1212bp) protein (404aa)
Putative glycosyltransferase Tax=Methyloglobulus morosus KoM1 RepID=V5BN03_9GAMM
Putative glycosyltransferase {ECO:0000313|EMBL:ESS69184.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobulus morosus KoM1.;"
walR; glycosyltransferase WalR
PLM2_30_b1_sep16_scaffold_1093_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(8682..8951)
DNA (270bp) protein (90aa)
Acyl carrier protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D8Y9_9BACT
Acyl carrier protein {ECO:0000313|EMBL:EDY17034.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
acyl carrier protein
PLM2_30_b1_sep16_scaffold_1093_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(9036..9359)
DNA (324bp) protein (108aa)
Sec-independent protein translocase protein TatA Tax=Chthoniobacter flavus Ellin428 RepID=B4D0Y8_9BACT
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
twin-arginine translocation protein, TatA/E family subunit
PLM2_30_b1_sep16_scaffold_1093_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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9469..10332
DNA (864bp) protein (288aa)
Probable DNA repair protein Cflav_PD3749 Tax=Pedosphaera parvula Ellin514 RepID=B9XGI1_9BACT
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Ku domain-containing protein
PLM2_30_b1_sep16_scaffold_1093_12
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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10389..10658
DNA (270bp) protein (90aa)
30S ribosomal protein S14 Tax=Verrucomicrobium spinosum RepID=UPI00017458E3
30S ribosomal protein S14
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
PLM2_30_b1_sep16_scaffold_1093_13
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

10736..12103
DNA (1368bp) protein (456aa)
hypothetical protein Tax=Verrucomicrobium spinosum RepID=UPI00017458E1
CBS domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
PLM2_30_b1_sep16_scaffold_1093_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(12351..12791)
DNA (441bp) protein (147aa)
Iron (Metal) dependent repressor, DtxR family Tax=Chthoniobacter flavus Ellin428 RepID=B4CTL8_9BACT
Iron (Metal) dependent repressor, DtxR family {ECO:0000313|EMBL:EDY21892.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
transcriptional regulator
PLM2_30_b1_sep16_scaffold_1093_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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12906..14309
DNA (1404bp) protein (468aa)
Divalent metal cation transporter MntH Tax=Chthoniobacter flavus Ellin428 RepID=B4CTL7_9BACT
Divalent metal cation transporter MntH {ECO:0000256|HAMAP-Rule:MF_00221}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Manganese transport protein mntH
PLM2_30_b1_sep16_scaffold_1093_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

14324..14749
DNA (426bp) protein (142aa)
UspA domain-containing protein
UspA domain protein bin=GWC2_OP3-like_45_7 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM2_30_b1_sep16_scaffold_1093_17
RifOxyB12_full_OP3_50_7_curated, Omnitrophica, Bacteria

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14818..16020
DNA (1203bp) protein (401aa)
Glycogen synthase Tax=Chthoniobacter flavus Ellin428 RepID=B4CVZ8_9BACT
glgA1; glycosyl transferase group 1
Tax=RifOxyB12_full_OP3_50_7_curated
PLM2_30_b1_sep16_scaffold_1093_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

16087..17178
DNA (1092bp) protein (364aa)
GTPase Obg Tax=Chthoniobacter flavus Ellin428 RepID=B4CUF9_9BACT
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
GTP-binding protein Obg/CgtA
PLM2_30_b1_sep16_scaffold_1093_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

17179..18447
DNA (1269bp) protein (423aa)
Glycosyl transferase group 1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6F8_9BACT
Glycosyl transferase group 1 {ECO:0000313|EMBL:EDY18067.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
putative glycosyltransferase
PLM2_30_b1_sep16_scaffold_1093_20
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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18573..19523
DNA (951bp) protein (317aa)
ATP synthase subunit a Tax=Pedosphaera parvula Ellin514 PF3_9BACT">RepID=B9XPF3_9BACT
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ATP synthase F0 subunit A
PLM2_30_b1_sep16_scaffold_1093_21
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

19569..19784
DNA (216bp) protein (72aa)
H+transporting two-sector ATPase C subunit Tax=Chthoniobacter flavus Ellin428 RepID=B4D6F4_9BACT
H+transporting two-sector ATPase C subunit {ECO:0000313|EMBL:EDY18063.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
H+transporting two-sector ATPase subunit C
PLM2_30_b1_sep16_scaffold_1093_22
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

19834..20280
DNA (447bp) protein (149aa)
ATP synthase subunit b Tax=Chthoniobacter flavus Ellin428 RepID=B4D6F3_9BACT
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398, ECO:0000256|RuleBase:RU003849}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
atpF; F0F1-type ATP synthase subunit b
Displaying 22 items

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