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PLM2_30_b1_sep16_scaffold_1774

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_b1_sep16_scaffold_1774_1
GWB1_OD1_42_6, Parcubacteria, Bacteria

Not on your lists

comp(163..939)
DNA (777bp) protein (259aa)
PHP domain protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3B8_SPHTD
PHP domain protein {ECO:0000313|EMBL:KKS65579.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_42_6.;"
PHP domain-containing protein
PLM2_30_b1_sep16_scaffold_1774_2
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1322..2374
DNA (1053bp) protein (351aa)
MscS Mechanosensitive ion channel Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UL50_SINMW
mechanosensitive ion channel MscS
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:ABR64380.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
PLM2_30_b1_sep16_scaffold_1774_3
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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comp(2434..3096)
DNA (663bp) protein (221aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XFX7_9BACT
4Fe-4S ferredoxin
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
PLM2_30_b1_sep16_scaffold_1774_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(3093..4259)
DNA (1167bp) protein (389aa)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein Tax=unclassified Verrucomicrobia (miscellaneous) RepID=UPI00035E7896
NADH dehydrogenase I subunit D
PLM2_30_b1_sep16_scaffold_1774_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(4369..5022)
DNA (654bp) protein (218aa)
NADH-quinone oxidoreductase {ECO:0000256|RuleBase:RU003582}; EC=1.6.5.11 {ECO:0000256|RuleBase:RU003582};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
NADH-quinone oxidoreductase Tax=Pedosphaera parvula Ellin514 RepID=B9XFX9_9BACT
NADH dehydrogenase
PLM2_30_b1_sep16_scaffold_1774_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(5025..5645)
DNA (621bp) protein (207aa)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
NADH-quinone oxidoreductase subunit B Tax=Pedosphaera parvula Ellin514 RepID=B9XFY0_9BACT
NADH dehydrogenase subunit B
PLM2_30_b1_sep16_scaffold_1774_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(5741..6115)
DNA (375bp) protein (125aa)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000256|HAMAP-Rule:MF_01394}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
NADH-quinone oxidoreductase subunit A Tax=Pedosphaera parvula Ellin514 RepID=B9XFY1_9BACT
NADH-quinone oxidoreductase subunit I
PLM2_30_b1_sep16_scaffold_1774_8
unknown

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6289..6402
DNA (114bp) protein (38aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_1774_9
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(6492..7055)
DNA (564bp) protein (188aa)
hypothetical protein Tax=Rubritalea marina RepID=UPI00037277C8
rplQ; 50S ribosomal protein L17
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
PLM2_30_b1_sep16_scaffold_1774_10
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(7086..8129)
DNA (1044bp) protein (348aa)
DNA-directed RNA polymerase subunit alpha Tax=Chthoniobacter flavus Ellin428 RepID=B4DBM6_9BACT
rpoA; DNA-directed RNA polymerase subunit alpha
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
PLM2_30_b1_sep16_scaffold_1774_11
unknown

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8448..8969
DNA (522bp) protein (174aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_1774_12
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(8832..9689)
DNA (858bp) protein (286aa)
Uncharacterized protein Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZWH9_OPITP
hypothetical protein
Tax=GWF2_Verrucomicrobia_62_7_curated
Displaying 12 items

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