ggKbase home page

PLM2_30_b1_sep16_scaffold_1789

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_b1_sep16_scaffold_1789_1

Not on your lists

507..731
DNA (225bp) protein (75aa)
Tetratricopeptide repeat {ECO:0000313|EMBL:AIA10985.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PLM2_30_b1_sep16_scaffold_1789_2

Not on your lists

comp(965..1915)
DNA (951bp) protein (317aa)
hypothetical protein Tax=Verrucomicrobium spinosum RepID=UPI000174438A
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48600.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_1789_trna_1
unknown

Not on your lists

2171..2243
DNA (73bp)
transferRNA Ala
PLM2_30_b1_sep16_scaffold_1789_3

Not on your lists

2347..3534
DNA (1188bp) protein (396aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKL0_KORVE
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48599.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_1789_4

Not on your lists

3839..4270
DNA (432bp) protein (144aa)
Cyclase/dehydrase Tax=Chthoniobacter flavus Ellin428 RepID=B4CYC4_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48598.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
cyclase/dehydrase
PLM2_30_b1_sep16_scaffold_1789_5

Not on your lists

4267..5511
DNA (1245bp) protein (415aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
fabF; 3-oxoacyl-ACP synthase II (EC:2.3.1.179)
Beta-ketoacyl synthase Tax=Chthoniobacter flavus Ellin428 RepID=B4CYC3_9BACT
PLM2_30_b1_sep16_scaffold_1789_6

Not on your lists

comp(5558..6256)
DNA (699bp) protein (233aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase Tax=Chthoniobacter flavus Ellin428 RepID=B4CWG2_9BACT
PLM2_30_b1_sep16_scaffold_1789_7

Not on your lists

comp(6379..6609)
DNA (231bp) protein (77aa)
UPF0109 protein CfE428DRAFT_2913 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1X5_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48595.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_1789_8

Not on your lists


comp(6736..7077)
DNA (342bp) protein (114aa)
30S ribosomal protein S16 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1X6_9BACT
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
30S ribosomal protein S16
PLM2_30_b1_sep16_scaffold_1789_9

Not on your lists


comp(7131..8477)
DNA (1347bp) protein (449aa)
Signal recognition particle protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D1X7_9BACT
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
signal recognition particle protein
PLM2_30_b1_sep16_scaffold_1789_10

Not on your lists

comp(8549..9652)
DNA (1104bp) protein (368aa)
Polysaccharide deacetylase Tax=Chthoniobacter flavus Ellin428 RepID=B4D1X8_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48592.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
polysaccharide deacetylase
Displaying 11 items

View Taxonomy